Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
USP50Q70EL3 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP50Q70EL3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP50Q70EL3 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USP50Q70EL3 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
USP50Q70EL3 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
USP50Q70EL3 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC20.35■□□□□ 0.85
USP50Q70EL3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC20.35■□□□□ 0.85
USP50Q70EL3 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
USP50Q70EL3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC20.35■□□□□ 0.85
USP50Q70EL3 IGHV3-71-201ENST00000523324 359 ntBASIC20.35■□□□□ 0.85
USP50Q70EL3 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.35■□□□□ 0.85
USP50Q70EL3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
USP50Q70EL3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
USP50Q70EL3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
USP50Q70EL3 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
USP50Q70EL3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC20.34■□□□□ 0.85
USP50Q70EL3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC20.34■□□□□ 0.85
USP50Q70EL3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
USP50Q70EL3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
USP50Q70EL3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
USP50Q70EL3 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC20.34■□□□□ 0.85
USP50Q70EL3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.34■□□□□ 0.85
USP50Q70EL3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC20.34■□□□□ 0.85
USP50Q70EL3 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
USP50Q70EL3 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.34■□□□□ 0.85
USP50Q70EL3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC20.34■□□□□ 0.85
USP50Q70EL3 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
USP50Q70EL3 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.33■□□□□ 0.85
USP50Q70EL3 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP50Q70EL3 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.33■□□□□ 0.85
USP50Q70EL3 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
USP50Q70EL3 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP50Q70EL3 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC20.33■□□□□ 0.85
USP50Q70EL3 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC20.33■□□□□ 0.85
USP50Q70EL3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC20.33■□□□□ 0.85
USP50Q70EL3 TP53TG3HP-202ENST00000569755 579 ntBASIC20.33■□□□□ 0.85
USP50Q70EL3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC20.33■□□□□ 0.85
USP50Q70EL3 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
USP50Q70EL3 IFT20-216ENST00000588477 774 ntTSL 5 BASIC20.33■□□□□ 0.85
USP50Q70EL3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
USP50Q70EL3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC20.33■□□□□ 0.84
USP50Q70EL3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
USP50Q70EL3 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.33■□□□□ 0.84
USP50Q70EL3 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.32■□□□□ 0.84
USP50Q70EL3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
USP50Q70EL3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC20.32■□□□□ 0.84
USP50Q70EL3 PTPA-220ENST00000436883 532 ntTSL 4 BASIC20.32■□□□□ 0.84
USP50Q70EL3 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC20.32■□□□□ 0.84
USP50Q70EL3 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
USP50Q70EL3 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC20.32■□□□□ 0.84
USP50Q70EL3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
USP50Q70EL3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
USP50Q70EL3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC20.32■□□□□ 0.84
USP50Q70EL3 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC20.32■□□□□ 0.84
USP50Q70EL3 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
USP50Q70EL3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
USP50Q70EL3 GRAMD4P3-201ENST00000621665 1669 ntBASIC20.32■□□□□ 0.84
USP50Q70EL3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
USP50Q70EL3 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.32■□□□□ 0.84
USP50Q70EL3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.31■□□□□ 0.84
USP50Q70EL3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP50Q70EL3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP50Q70EL3 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC20.31■□□□□ 0.84
USP50Q70EL3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP50Q70EL3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP50Q70EL3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP50Q70EL3 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.31■□□□□ 0.84
USP50Q70EL3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP50Q70EL3 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC20.31■□□□□ 0.84
USP50Q70EL3 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
USP50Q70EL3 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
USP50Q70EL3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
USP50Q70EL3 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
USP50Q70EL3 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC20.31■□□□□ 0.84
USP50Q70EL3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms