Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.17
PTCHD4Q6ZW05 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 AP000523.1-201ENST00000398242 1049 ntBASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 DUT-205ENST00000558813 769 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 GCSHP2-201ENST00000560971 527 ntBASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 AL139384.1-201ENST00000612143 3047 ntBASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
PTCHD4Q6ZW05 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 AC087499.1-201ENST00000418141 1075 ntBASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 AC145285.6-201ENST00000604632 637 ntBASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
PTCHD4Q6ZW05 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 AC046158.3-201ENST00000624947 2558 ntBASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 FLJ38576-201ENST00000623820 2459 ntBASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
PTCHD4Q6ZW05 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms