Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
FOXR1Q6PIV2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 PHGDH-209ENST00000641074 1780 ntBASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 AL138688.1-201ENST00000624851 1594 ntBASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 AL136038.3-201ENST00000561909 1096 ntBASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 AC083849.1-201ENST00000615227 514 ntBASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.23■□□□□ 0.51
FOXR1Q6PIV2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 LINC02228-204ENST00000642115 2962 ntBASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 AL691432.3-201ENST00000621860 400 ntBASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
FOXR1Q6PIV2 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.21■□□□□ 0.51
FOXR1Q6PIV2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms