Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 AL157888.1-201ENST00000631930 593 ntBASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 AC099063.4-201ENST00000641099 1602 ntBASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
TMEM53Q6P2H8 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 GMCL1P1-201ENST00000463439 1581 ntBASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 AC006011.2-201ENST00000621313 1158 ntBASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TMEM53Q6P2H8 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 STARP1-201ENST00000397973 869 ntBASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 RASA4DP-201ENST00000460726 1199 ntBASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 AC008687.5-201ENST00000593746 558 ntBASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TMEM53Q6P2H8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms