Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 AC009102.3-201ENST00000623118 1491 ntBASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 ARMC10P1-201ENST00000313754 855 ntBASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 AC087388.1-201ENST00000571370 1112 ntBASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 AC024243.1-201ENST00000609234 778 ntBASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 AL138966.2-201ENST00000621997 464 ntBASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 HLA-J-201ENST00000462773 1622 ntBASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 AC034236.2-201ENST00000606662 1610 ntBASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.76■□□□□ 0.27
PPP4R4Q6NUP7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 AL359075.1-203ENST00000462729 1002 ntBASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 LINC01238-205ENST00000567549 1107 ntBASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 AL590326.2-201ENST00000625139 305 ntBASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 AL163051.1-201ENST00000569214 1512 ntBASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPP4R4Q6NUP7 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 MIR149-201ENST00000384879 89 ntBASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 RNF152P1-201ENST00000397754 604 ntBASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 DUTP2-201ENST00000519164 463 ntBASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 AC011558.1-201ENST00000623459 338 ntBASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 AL031432.5-201ENST00000641059 760 ntBASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.74■□□□□ 0.27
PPP4R4Q6NUP7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms