Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 AC139713.2-201ENST00000641328 2723 ntBASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.89■□□□□ 0.29
HIST2H2AA3Q6FI13 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 CROCCP2-202ENST00000412962 2773 ntBASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AC091607.1-201ENST00000490318 1060 ntBASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AC074051.2-201ENST00000565115 352 ntBASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AC092329.2-201ENST00000598402 547 ntBASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 AC011467.2-201ENST00000598425 242 ntBASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 PP12613-201ENST00000424958 2230 ntBASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
HIST2H2AA3Q6FI13 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 TP73-AS1-210ENST00000637775 1455 ntBASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 NSUN5P1-202ENST00000421140 1535 ntBASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 NSUN5P2-203ENST00000457352 1529 ntBASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 POM121L3P-201ENST00000419331 1163 ntBASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 ATP5G2P1-201ENST00000433580 426 ntBASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 AP005901.3-202ENST00000581653 237 ntBASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 AC019129.2-201ENST00000609837 1235 ntBASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.87■□□□□ 0.29
HIST2H2AA3Q6FI13 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
HIST2H2AA3Q6FI13 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms