Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 PNKD-204ENST00000436005 978 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 REXO1L9P-201ENST00000604264 2108 ntBASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LYSMD4Q5XG99 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 KRT18P32-201ENST00000424695 1287 ntBASIC17■□□□□ 0.31
LYSMD4Q5XG99 BASP1P1-201ENST00000430708 665 ntBASIC17■□□□□ 0.31
LYSMD4Q5XG99 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 AP000997.3-201ENST00000623333 2250 ntBASIC17■□□□□ 0.31
LYSMD4Q5XG99 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
LYSMD4Q5XG99 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LYSMD4Q5XG99 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 AC079140.1-201ENST00000508039 487 ntBASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 WIZP1-201ENST00000531444 2299 ntBASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.99■□□□□ 0.31
LYSMD4Q5XG99 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
LYSMD4Q5XG99 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms