Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
LONRF3Q496Y0 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 AC011676.5-201ENST00000624864 2660 ntBASIC19.84■□□□□ 0.77
LONRF3Q496Y0 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 Z69720.1-201ENST00000601483 472 ntBASIC19.84■□□□□ 0.77
LONRF3Q496Y0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC19.84■□□□□ 0.77
LONRF3Q496Y0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LONRF3Q496Y0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
LONRF3Q496Y0 AC097374.2-201ENST00000618617 1306 ntBASIC19.83■□□□□ 0.77
LONRF3Q496Y0 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LONRF3Q496Y0 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
LONRF3Q496Y0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
LONRF3Q496Y0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
LONRF3Q496Y0 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.83■□□□□ 0.77
LONRF3Q496Y0 AC079781.3-201ENST00000449110 356 ntBASIC19.83■□□□□ 0.77
LONRF3Q496Y0 AL031008.1-201ENST00000619963 541 ntBASIC19.83■□□□□ 0.77
LONRF3Q496Y0 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC19.83■□□□□ 0.76
LONRF3Q496Y0 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 NSUN5P1-202ENST00000421140 1535 ntBASIC19.82■□□□□ 0.76
LONRF3Q496Y0 NSUN5P2-203ENST00000457352 1529 ntBASIC19.82■□□□□ 0.76
LONRF3Q496Y0 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 AC084018.2-201ENST00000613093 2607 ntBASIC19.82■□□□□ 0.76
LONRF3Q496Y0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 NUS1P2-201ENST00000417358 873 ntBASIC19.82■□□□□ 0.76
LONRF3Q496Y0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 AC009078.2-202ENST00000463353 338 ntBASIC19.82■□□□□ 0.76
LONRF3Q496Y0 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.82■□□□□ 0.76
LONRF3Q496Y0 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms