Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 SLC25A1P3-201ENST00000395415 828 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ALG1L5P-201ENST00000482043 771 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AC107918.2-201ENST00000530817 355 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AC023141.13-201ENST00000604991 943 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AL691403.2-201ENST00000618460 490 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 AC007064.4-201ENST00000637740 555 ntBASIC20.78■□□□□ 0.92
PDS5AQ29RF7 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 CYP51A1P2-201ENST00000419457 1499 ntBASIC20.77■□□□□ 0.92
PDS5AQ29RF7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC20.77■□□□□ 0.92
PDS5AQ29RF7 BCAR1-209ENST00000546196 1340 ntBASIC20.77■□□□□ 0.92
PDS5AQ29RF7 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 AC005829.1-201ENST00000570002 483 ntBASIC20.77■□□□□ 0.91
PDS5AQ29RF7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDS5AQ29RF7 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 AC092183.1-201ENST00000469884 875 ntBASIC20.76■□□□□ 0.91
PDS5AQ29RF7 SMN2-210ENST00000511812 867 ntTSL 2 BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDS5AQ29RF7 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 AP001160.2-201ENST00000596071 487 ntBASIC20.75■□□□□ 0.91
PDS5AQ29RF7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PDS5AQ29RF7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 AC025580.3-201ENST00000617932 1424 ntBASIC20.74■□□□□ 0.91
PDS5AQ29RF7 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC20.74■□□□□ 0.91
PDS5AQ29RF7 REXO1L3P-201ENST00000622202 1288 ntBASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms