Protein–RNA interactions for Protein: Q13296

SCGB2A2, Mammaglobin-A, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCGB2A2Q13296 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 RPS8P6-201ENST00000426177 609 ntBASIC14.34□□□□□ -0.11
SCGB2A2Q13296 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 AC009947.1-201ENST00000444350 727 ntBASIC14.34□□□□□ -0.11
SCGB2A2Q13296 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 AC012640.2-201ENST00000561606 901 ntBASIC14.34□□□□□ -0.11
SCGB2A2Q13296 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.34□□□□□ -0.11
SCGB2A2Q13296 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.33□□□□□ -0.11
SCGB2A2Q13296 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 CRYGEP-201ENST00000412192 528 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AL020989.1-201ENST00000422979 469 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AP006288.1-201ENST00000446065 395 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AC112482.1-201ENST00000492080 688 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 SNHG9-202ENST00000564014 471 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AC005829.1-201ENST00000570002 483 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 COPE-211ENST00000600932 1144 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AC064836.3-201ENST00000607928 673 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AC134684.3-201ENST00000641758 218 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 PMPCAP1-201ENST00000508114 1576 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 AL161938.1-201ENST00000569833 2180 ntBASIC14.33□□□□□ -0.12
SCGB2A2Q13296 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SCGB2A2Q13296 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SCGB2A2Q13296 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC14.32□□□□□ -0.12
SCGB2A2Q13296 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SCGB2A2Q13296 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms