Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AC133963.1-201ENST00000504166 1679 ntBASIC13.4□□□□□ -0.26
HIST1H1AQ02539 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 PP12613-201ENST00000424958 2230 ntBASIC13.4□□□□□ -0.26
HIST1H1AQ02539 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AL121761.2-201ENST00000598007 1648 ntBASIC13.4□□□□□ -0.26
HIST1H1AQ02539 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AL355312.1-201ENST00000407115 2176 ntBASIC13.4□□□□□ -0.26
HIST1H1AQ02539 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 GXYLT1P3-201ENST00000453058 1193 ntBASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AL136038.4-201ENST00000603606 1261 ntBASIC13.4□□□□□ -0.26
HIST1H1AQ02539 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 AL031432.5-201ENST00000641059 760 ntBASIC13.4□□□□□ -0.26
HIST1H1AQ02539 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
HIST1H1AQ02539 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
HIST1H1AQ02539 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.4□□□□□ -0.27
HIST1H1AQ02539 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
HIST1H1AQ02539 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC13.4□□□□□ -0.27
HIST1H1AQ02539 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.4□□□□□ -0.27
HIST1H1AQ02539 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 AL137013.1-201ENST00000432946 1228 ntBASIC13.39□□□□□ -0.27
HIST1H1AQ02539 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 AC010203.1-204ENST00000548782 407 ntBASIC13.39□□□□□ -0.27
HIST1H1AQ02539 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 AC005363.2-201ENST00000618631 242 ntBASIC13.39□□□□□ -0.27
HIST1H1AQ02539 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.39□□□□□ -0.27
HIST1H1AQ02539 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HIST1H1AQ02539 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms