Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 ADH5P3-201ENST00000433842 1137 ntBASIC19.71■□□□□ 0.75
CCNA1P78396 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNA1P78396 BCRP1-201ENST00000444246 691 ntBASIC19.71■□□□□ 0.75
CCNA1P78396 SLC25A6P2-201ENST00000497974 877 ntBASIC19.71■□□□□ 0.75
CCNA1P78396 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC19.71■□□□□ 0.75
CCNA1P78396 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC19.71■□□□□ 0.75
CCNA1P78396 AC109322.1-201ENST00000524499 1264 ntBASIC19.71■□□□□ 0.75
CCNA1P78396 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
CCNA1P78396 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CCNA1P78396 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
CCNA1P78396 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.71■□□□□ 0.75
CCNA1P78396 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.71■□□□□ 0.75
CCNA1P78396 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
CCNA1P78396 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CCNA1P78396 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.71■□□□□ 0.74
CCNA1P78396 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CCNA1P78396 AL671277.1-201ENST00000429656 993 ntBASIC19.7■□□□□ 0.74
CCNA1P78396 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC19.7■□□□□ 0.74
CCNA1P78396 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC19.7■□□□□ 0.74
CCNA1P78396 AC067863.1-201ENST00000494933 530 ntBASIC19.7■□□□□ 0.74
CCNA1P78396 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.7■□□□□ 0.74
CCNA1P78396 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC19.7■□□□□ 0.74
CCNA1P78396 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC19.7■□□□□ 0.74
CCNA1P78396 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 AL139327.4-201ENST00000612362 153 ntBASIC19.7■□□□□ 0.74
CCNA1P78396 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.7■□□□□ 0.74
CCNA1P78396 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC19.7■□□□□ 0.74
CCNA1P78396 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CCNA1P78396 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC19.7■□□□□ 0.74
CCNA1P78396 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CCNA1P78396 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CCNA1P78396 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CCNA1P78396 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCNA1P78396 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
CCNA1P78396 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CCNA1P78396 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNA1P78396 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CCNA1P78396 HLA-DRB6-201ENST00000411500 1235 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 AL355306.1-201ENST00000415580 579 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 AL627223.1-201ENST00000416693 442 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 AC140658.5-201ENST00000438532 169 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.69■□□□□ 0.74
CCNA1P78396 SPDYE11-202ENST00000450699 704 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC19.69■□□□□ 0.74
CCNA1P78396 SPDYE9P-201ENST00000570642 692 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 SPDYE10P-202ENST00000612005 668 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 SPDYE8P-202ENST00000612377 668 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNA1P78396 AC009093.7-201ENST00000623853 1223 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.69■□□□□ 0.74
CCNA1P78396 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
CCNA1P78396 BX323043.1-201ENST00000641006 1765 ntBASIC19.69■□□□□ 0.74
CCNA1P78396 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CCNA1P78396 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms