Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO4P61968 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 AC074386.1-202ENST00000463561 864 ntBASIC14.25□□□□□ -0.13
LMO4P61968 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 CFL1-202ENST00000524553 860 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO4P61968 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO4P61968 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LMO4P61968 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LMO4P61968 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 CD276-201ENST00000318424 2738 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO4P61968 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC14.25□□□□□ -0.13
LMO4P61968 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LMO4P61968 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LMO4P61968 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC14.25□□□□□ -0.13
LMO4P61968 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LMO4P61968 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LMO4P61968 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 ELL2P1-201ENST00000413990 1906 ntBASIC14.24□□□□□ -0.13
LMO4P61968 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO4P61968 CD82-202ENST00000342935 967 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO4P61968 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC14.24□□□□□ -0.13
LMO4P61968 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.24□□□□□ -0.13
LMO4P61968 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC14.24□□□□□ -0.13
LMO4P61968 AL596442.2-201ENST00000610240 980 ntBASIC14.24□□□□□ -0.13
LMO4P61968 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
LMO4P61968 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.24□□□□□ -0.13
LMO4P61968 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
LMO4P61968 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC14.24□□□□□ -0.13
LMO4P61968 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LMO4P61968 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
LMO4P61968 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 AL355312.1-201ENST00000407115 2176 ntBASIC14.23□□□□□ -0.13
LMO4P61968 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC14.23□□□□□ -0.13
LMO4P61968 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO4P61968 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
LMO4P61968 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 AC254562.1-201ENST00000417586 456 ntBASIC14.23□□□□□ -0.13
LMO4P61968 PMS2P2-201ENST00000425039 1128 ntBASIC14.23□□□□□ -0.13
LMO4P61968 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.23□□□□□ -0.13
LMO4P61968 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 CEND1P1-201ENST00000451006 455 ntBASIC14.23□□□□□ -0.13
LMO4P61968 AC087163.2-201ENST00000457299 853 ntBASIC14.23□□□□□ -0.13
LMO4P61968 SLC25A6P2-201ENST00000497974 877 ntBASIC14.23□□□□□ -0.13
LMO4P61968 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO4P61968 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
LMO4P61968 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC14.23□□□□□ -0.13
LMO4P61968 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
LMO4P61968 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms