Protein–RNA interactions for Protein: P61966

AP1S1, AP-1 complex subunit sigma-1A, humanhuman

Predictions only

Length 158 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S1P61966 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.54■□□□□ 0.4
AP1S1P61966 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
AP1S1P61966 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.54■□□□□ 0.4
AP1S1P61966 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.54■□□□□ 0.4
AP1S1P61966 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 MRPL3P1-201ENST00000400109 1033 ntBASIC17.54■□□□□ 0.4
AP1S1P61966 AC026396.1-201ENST00000419388 421 ntBASIC17.54■□□□□ 0.4
AP1S1P61966 RPS2P1-201ENST00000434010 821 ntBASIC17.54■□□□□ 0.4
AP1S1P61966 OR7E14P-202ENST00000530490 1290 ntBASIC17.54■□□□□ 0.4
AP1S1P61966 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.54■□□□□ 0.4
AP1S1P61966 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
AP1S1P61966 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
AP1S1P61966 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.54■□□□□ 0.4
AP1S1P61966 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.54■□□□□ 0.4
AP1S1P61966 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
AP1S1P61966 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
AP1S1P61966 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.54■□□□□ 0.4
AP1S1P61966 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.54■□□□□ 0.4
AP1S1P61966 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
AP1S1P61966 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.54■□□□□ 0.4
AP1S1P61966 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
AP1S1P61966 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.53■□□□□ 0.4
AP1S1P61966 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.53■□□□□ 0.4
AP1S1P61966 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
AP1S1P61966 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.53■□□□□ 0.4
AP1S1P61966 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC17.53■□□□□ 0.4
AP1S1P61966 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.53■□□□□ 0.4
AP1S1P61966 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
AP1S1P61966 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.53■□□□□ 0.4
AP1S1P61966 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.53■□□□□ 0.4
AP1S1P61966 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.53■□□□□ 0.4
AP1S1P61966 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.53■□□□□ 0.4
AP1S1P61966 AC006557.2-201ENST00000592985 1240 ntBASIC17.53■□□□□ 0.4
AP1S1P61966 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 AC148477.8-201ENST00000624298 468 ntBASIC17.53■□□□□ 0.4
AP1S1P61966 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.53■□□□□ 0.4
AP1S1P61966 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
AP1S1P61966 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
AP1S1P61966 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
AP1S1P61966 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
AP1S1P61966 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.52■□□□□ 0.4
AP1S1P61966 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
AP1S1P61966 AL031284.1-201ENST00000419297 478 ntBASIC17.52■□□□□ 0.4
AP1S1P61966 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC17.52■□□□□ 0.4
AP1S1P61966 LINC00982-205ENST00000420957 435 ntBASIC17.52■□□□□ 0.4
AP1S1P61966 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC17.52■□□□□ 0.4
AP1S1P61966 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC17.52■□□□□ 0.4
AP1S1P61966 FDX1P1-201ENST00000449115 551 ntBASIC17.52■□□□□ 0.4
AP1S1P61966 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.52■□□□□ 0.4
AP1S1P61966 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC17.52■□□□□ 0.4
AP1S1P61966 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.52■□□□□ 0.4
AP1S1P61966 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
AP1S1P61966 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.52■□□□□ 0.4
AP1S1P61966 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
AP1S1P61966 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
AP1S1P61966 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP1S1P61966 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.52■□□□□ 0.39
AP1S1P61966 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
AP1S1P61966 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.52■□□□□ 0.39
AP1S1P61966 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
AP1S1P61966 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
AP1S1P61966 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.51■□□□□ 0.39
AP1S1P61966 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
AP1S1P61966 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms