Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC15.62■□□□□ 0.09
CLRN1P58418 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLRN1P58418 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.62■□□□□ 0.09
CLRN1P58418 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.61■□□□□ 0.09
CLRN1P58418 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.61■□□□□ 0.09
CLRN1P58418 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.61■□□□□ 0.09
CLRN1P58418 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 PPIH-202ENST00000372549 327 ntTSL 3 BASIC15.61■□□□□ 0.09
CLRN1P58418 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.61■□□□□ 0.09
CLRN1P58418 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.61■□□□□ 0.09
CLRN1P58418 AC103564.2-201ENST00000432853 1299 ntBASIC15.61■□□□□ 0.09
CLRN1P58418 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.61■□□□□ 0.09
CLRN1P58418 AC091607.1-201ENST00000490318 1060 ntBASIC15.61■□□□□ 0.09
CLRN1P58418 AC122714.2-201ENST00000502787 707 ntBASIC15.61■□□□□ 0.09
CLRN1P58418 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.61■□□□□ 0.09
CLRN1P58418 TPSP2-201ENST00000561760 610 ntBASIC15.61■□□□□ 0.09
CLRN1P58418 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.61■□□□□ 0.09
CLRN1P58418 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC15.61■□□□□ 0.09
CLRN1P58418 BCL10-202ENST00000620248 774 ntTSL 5 BASIC15.61■□□□□ 0.09
CLRN1P58418 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.61■□□□□ 0.09
CLRN1P58418 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.61■□□□□ 0.09
CLRN1P58418 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 BANP-227ENST00000626016 2144 ntTSL 2 BASIC15.61■□□□□ 0.09
CLRN1P58418 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLRN1P58418 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.6■□□□□ 0.09
CLRN1P58418 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLRN1P58418 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CLRN1P58418 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 AP002383.4-201ENST00000442518 975 ntBASIC15.6■□□□□ 0.09
CLRN1P58418 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.6■□□□□ 0.09
CLRN1P58418 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC15.6■□□□□ 0.09
CLRN1P58418 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.6■□□□□ 0.09
CLRN1P58418 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC15.6■□□□□ 0.09
CLRN1P58418 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
CLRN1P58418 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
CLRN1P58418 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.6■□□□□ 0.09
CLRN1P58418 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 TPR-209ENST00000613151 2478 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
CLRN1P58418 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLRN1P58418 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
CLRN1P58418 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
CLRN1P58418 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLRN1P58418 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CLRN1P58418 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLRN1P58418 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
CLRN1P58418 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.59■□□□□ 0.09
CLRN1P58418 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.59■□□□□ 0.09
CLRN1P58418 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLRN1P58418 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
CLRN1P58418 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CLRN1P58418 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CLRN1P58418 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CLRN1P58418 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms