Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
SNX16P57768 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX16P57768 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX16P57768 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SNX16P57768 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX16P57768 AC009336.1-201ENST00000608941 1553 ntBASIC18.42■□□□□ 0.54
SNX16P57768 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNX16P57768 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNX16P57768 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SNX16P57768 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SNX16P57768 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.41■□□□□ 0.54
SNX16P57768 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.41■□□□□ 0.54
SNX16P57768 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 RBM17P3-201ENST00000417687 1192 ntBASIC18.41■□□□□ 0.54
SNX16P57768 TSPY19P-201ENST00000418461 509 ntBASIC18.41■□□□□ 0.54
SNX16P57768 AL020989.1-201ENST00000422979 469 ntBASIC18.41■□□□□ 0.54
SNX16P57768 TSPY18P-201ENST00000441642 509 ntBASIC18.41■□□□□ 0.54
SNX16P57768 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.41■□□□□ 0.54
SNX16P57768 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.41■□□□□ 0.54
SNX16P57768 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SNX16P57768 KRT18P56-201ENST00000507275 550 ntBASIC18.41■□□□□ 0.54
SNX16P57768 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC18.41■□□□□ 0.54
SNX16P57768 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.41■□□□□ 0.54
SNX16P57768 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.41■□□□□ 0.54
SNX16P57768 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.41■□□□□ 0.54
SNX16P57768 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
SNX16P57768 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
SNX16P57768 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.41■□□□□ 0.54
SNX16P57768 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNX16P57768 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SNX16P57768 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX16P57768 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SNX16P57768 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SNX16P57768 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SNX16P57768 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.4■□□□□ 0.54
SNX16P57768 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX16P57768 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX16P57768 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.4■□□□□ 0.54
SNX16P57768 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.4■□□□□ 0.54
SNX16P57768 AC132008.2-207ENST00000454517 770 ntBASIC18.4■□□□□ 0.54
SNX16P57768 SIGLEC30P-201ENST00000455569 941 ntBASIC18.4■□□□□ 0.54
SNX16P57768 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX16P57768 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.4■□□□□ 0.54
SNX16P57768 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC18.4■□□□□ 0.54
SNX16P57768 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.4■□□□□ 0.54
SNX16P57768 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SNX16P57768 AC005332.8-201ENST00000622750 2735 ntBASIC18.4■□□□□ 0.54
SNX16P57768 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SNX16P57768 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNX16P57768 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SNX16P57768 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC18.39■□□□□ 0.54
SNX16P57768 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SNX16P57768 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.39■□□□□ 0.54
SNX16P57768 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC18.39■□□□□ 0.54
SNX16P57768 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.39■□□□□ 0.54
SNX16P57768 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
SNX16P57768 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SNX16P57768 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
SNX16P57768 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC18.39■□□□□ 0.53
SNX16P57768 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC18.39■□□□□ 0.53
SNX16P57768 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms