Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 AP000523.1-201ENST00000398242 1049 ntBASIC16.59■□□□□ 0.25
NR1H2P55055 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.59■□□□□ 0.25
NR1H2P55055 AC117947.1-201ENST00000427448 529 ntBASIC16.59■□□□□ 0.25
NR1H2P55055 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.59■□□□□ 0.25
NR1H2P55055 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.59■□□□□ 0.25
NR1H2P55055 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.59■□□□□ 0.25
NR1H2P55055 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.59■□□□□ 0.25
NR1H2P55055 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
NR1H2P55055 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.58■□□□□ 0.25
NR1H2P55055 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H2P55055 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H2P55055 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.58■□□□□ 0.25
NR1H2P55055 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
NR1H2P55055 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.58■□□□□ 0.25
NR1H2P55055 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC16.58■□□□□ 0.25
NR1H2P55055 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
NR1H2P55055 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H2P55055 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H2P55055 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
NR1H2P55055 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NR1H2P55055 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H2P55055 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H2P55055 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.58■□□□□ 0.24
NR1H2P55055 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.58■□□□□ 0.24
NR1H2P55055 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.58■□□□□ 0.24
NR1H2P55055 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H2P55055 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H2P55055 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
NR1H2P55055 AC141257.4-201ENST00000634557 245 ntBASIC16.58■□□□□ 0.24
NR1H2P55055 AC136944.6-201ENST00000634818 245 ntBASIC16.58■□□□□ 0.24
NR1H2P55055 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC16.58■□□□□ 0.24
NR1H2P55055 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC16.58■□□□□ 0.24
NR1H2P55055 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H2P55055 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.58■□□□□ 0.24
NR1H2P55055 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H2P55055 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.58■□□□□ 0.24
NR1H2P55055 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H2P55055 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H2P55055 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NR1H2P55055 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NR1H2P55055 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NR1H2P55055 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 FAM8A6P-201ENST00000407496 1135 ntBASIC16.57■□□□□ 0.24
NR1H2P55055 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.57■□□□□ 0.24
NR1H2P55055 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 YBX1P2-201ENST00000489612 999 ntBASIC16.57■□□□□ 0.24
NR1H2P55055 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.57■□□□□ 0.24
NR1H2P55055 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.57■□□□□ 0.24
NR1H2P55055 AC139887.4-201ENST00000607877 719 ntBASIC16.57■□□□□ 0.24
NR1H2P55055 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.57■□□□□ 0.24
NR1H2P55055 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.57■□□□□ 0.24
NR1H2P55055 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NR1H2P55055 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms