Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUBP1P53384 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NUBP1P53384 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NUBP1P53384 AC008764.6-201ENST00000595909 2069 ntBASIC17.32■□□□□ 0.36
NUBP1P53384 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.31■□□□□ 0.36
NUBP1P53384 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NUBP1P53384 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
NUBP1P53384 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17.31■□□□□ 0.36
NUBP1P53384 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC17.31■□□□□ 0.36
NUBP1P53384 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.31■□□□□ 0.36
NUBP1P53384 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC17.31■□□□□ 0.36
NUBP1P53384 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NUBP1P53384 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 GIMAP3P-201ENST00000495150 836 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.31■□□□□ 0.36
NUBP1P53384 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NUBP1P53384 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.31■□□□□ 0.36
NUBP1P53384 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.31■□□□□ 0.36
NUBP1P53384 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.31■□□□□ 0.36
NUBP1P53384 AC010931.3-201ENST00000561647 554 ntTSL 3 BASIC17.31■□□□□ 0.36
NUBP1P53384 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC17.31■□□□□ 0.36
NUBP1P53384 AC109462.3-201ENST00000573934 613 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC17.31■□□□□ 0.36
NUBP1P53384 AC025165.5-201ENST00000602802 578 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC17.31■□□□□ 0.36
NUBP1P53384 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 AC006963.1-201ENST00000624003 1052 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC17.31■□□□□ 0.36
NUBP1P53384 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 AL022393.1-201ENST00000625142 1677 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 AC022144.1-201ENST00000602255 1580 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NUBP1P53384 UXT-AS1-201ENST00000590504 1525 ntBASIC17.31■□□□□ 0.36
NUBP1P53384 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 LINC00570-201ENST00000417473 1330 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.3■□□□□ 0.36
NUBP1P53384 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.3■□□□□ 0.36
NUBP1P53384 TTC32-201ENST00000333610 822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 MYCLP1-201ENST00000372451 1075 ntBASIC17.3■□□□□ 0.36
NUBP1P53384 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 GALT-202ENST00000450095 1280 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 AL022319.1-201ENST00000458183 1167 ntBASIC17.3■□□□□ 0.36
NUBP1P53384 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.3■□□□□ 0.36
NUBP1P53384 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.3■□□□□ 0.36
NUBP1P53384 HILS1-202ENST00000545329 423 ntBASIC17.3■□□□□ 0.36
NUBP1P53384 CNIH1-203ENST00000553660 785 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.3■□□□□ 0.36
NUBP1P53384 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.3■□□□□ 0.36
NUBP1P53384 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 AC099343.3-201ENST00000605834 2503 ntBASIC17.3■□□□□ 0.36
NUBP1P53384 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.3■□□□□ 0.36
NUBP1P53384 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NUBP1P53384 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NUBP1P53384 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.3■□□□□ 0.36
NUBP1P53384 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NUBP1P53384 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.3■□□□□ 0.36
NUBP1P53384 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NUBP1P53384 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
NUBP1P53384 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 AL353779.1-201ENST00000434793 351 ntBASIC17.29■□□□□ 0.36
NUBP1P53384 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC17.29■□□□□ 0.36
NUBP1P53384 AC114322.1-201ENST00000506771 926 ntBASIC17.29■□□□□ 0.36
NUBP1P53384 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.29■□□□□ 0.36
NUBP1P53384 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC17.29■□□□□ 0.36
NUBP1P53384 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
NUBP1P53384 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NUBP1P53384 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC17.29■□□□□ 0.36
NUBP1P53384 AC104072.1-201ENST00000568817 668 ntBASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms