Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 BX640515.1-201ENST00000617215 977 ntBASIC16.38■□□□□ 0.21
SMSP52788 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.38■□□□□ 0.21
SMSP52788 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SMSP52788 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 AL024508.2-201ENST00000607749 1894 ntBASIC16.37■□□□□ 0.21
SMSP52788 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 IGHGP-201ENST00000390555 1178 ntBASIC16.37■□□□□ 0.21
SMSP52788 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC16.37■□□□□ 0.21
SMSP52788 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.37■□□□□ 0.21
SMSP52788 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 LINC00602-201ENST00000629776 2065 ntBASIC16.37■□□□□ 0.21
SMSP52788 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SMSP52788 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 AP001094.4-201ENST00000579008 2176 ntBASIC16.37■□□□□ 0.21
SMSP52788 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.37■□□□□ 0.21
SMSP52788 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.37■□□□□ 0.21
SMSP52788 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SMSP52788 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
SMSP52788 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.36■□□□□ 0.21
SMSP52788 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SMSP52788 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 AL590627.1-203ENST00000421194 1026 ntBASIC16.36■□□□□ 0.21
SMSP52788 MINOS1P3-201ENST00000457048 203 ntBASIC16.36■□□□□ 0.21
SMSP52788 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
SMSP52788 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.36■□□□□ 0.21
SMSP52788 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.36■□□□□ 0.21
SMSP52788 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.36■□□□□ 0.21
SMSP52788 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.36■□□□□ 0.21
SMSP52788 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.36■□□□□ 0.21
SMSP52788 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.36■□□□□ 0.21
SMSP52788 AC011840.4-201ENST00000578471 627 ntBASIC16.36■□□□□ 0.21
SMSP52788 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.36■□□□□ 0.21
SMSP52788 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.36■□□□□ 0.21
SMSP52788 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.36■□□□□ 0.21
SMSP52788 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
SMSP52788 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.36■□□□□ 0.21
SMSP52788 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.36■□□□□ 0.21
SMSP52788 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SMSP52788 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms