Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
GTF2A1P52655 AC005915.1-201ENST00000624912 2018 ntBASIC17.14■□□□□ 0.33
GTF2A1P52655 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GTF2A1P52655 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
GTF2A1P52655 AC116351.2-201ENST00000606540 1585 ntBASIC17.14■□□□□ 0.33
GTF2A1P52655 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GTF2A1P52655 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
GTF2A1P52655 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
GTF2A1P52655 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GTF2A1P52655 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
GTF2A1P52655 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
GTF2A1P52655 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
GTF2A1P52655 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
GTF2A1P52655 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
GTF2A1P52655 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 AC005252.3-201ENST00000623855 2258 ntBASIC17.13■□□□□ 0.33
GTF2A1P52655 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GTF2A1P52655 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 AC073347.1-201ENST00000421633 2643 ntBASIC17.13■□□□□ 0.33
GTF2A1P52655 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 DUX4L16-201ENST00000555130 1264 ntBASIC17.13■□□□□ 0.33
GTF2A1P52655 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GTF2A1P52655 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
GTF2A1P52655 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
GTF2A1P52655 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
GTF2A1P52655 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GTF2A1P52655 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.12■□□□□ 0.33
GTF2A1P52655 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.12■□□□□ 0.33
GTF2A1P52655 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GTF2A1P52655 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.12■□□□□ 0.33
GTF2A1P52655 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.12■□□□□ 0.33
GTF2A1P52655 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.12■□□□□ 0.33
GTF2A1P52655 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.12■□□□□ 0.33
GTF2A1P52655 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
GTF2A1P52655 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
GTF2A1P52655 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.12■□□□□ 0.33
GTF2A1P52655 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GTF2A1P52655 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.12■□□□□ 0.33
GTF2A1P52655 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.12■□□□□ 0.33
GTF2A1P52655 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 CICP20-201ENST00000443330 2801 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.11■□□□□ 0.33
GTF2A1P52655 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.11■□□□□ 0.33
GTF2A1P52655 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
GTF2A1P52655 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.11■□□□□ 0.33
GTF2A1P52655 AC137761.2-201ENST00000561729 223 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 AC145350.3-201ENST00000569033 163 ntBASIC17.11■□□□□ 0.33
GTF2A1P52655 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC17.11■□□□□ 0.33
GTF2A1P52655 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GTF2A1P52655 AL589743.5-201ENST00000616611 1050 ntBASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms