Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
RAB28P51157 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.84■□□□□ 0.29
RAB28P51157 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RAB28P51157 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
RAB28P51157 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RAB28P51157 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RAB28P51157 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.83■□□□□ 0.28
RAB28P51157 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
RAB28P51157 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB28P51157 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB28P51157 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 LAGE3P1-201ENST00000425356 484 ntBASIC16.83■□□□□ 0.28
RAB28P51157 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
RAB28P51157 NCF1C-201ENST00000438382 1427 ntBASIC16.83■□□□□ 0.28
RAB28P51157 AC009078.2-202ENST00000463353 338 ntBASIC16.83■□□□□ 0.28
RAB28P51157 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB28P51157 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB28P51157 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
RAB28P51157 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB28P51157 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB28P51157 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.83■□□□□ 0.28
RAB28P51157 SLC25A6P4-201ENST00000586535 553 ntBASIC16.83■□□□□ 0.28
RAB28P51157 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.83■□□□□ 0.28
RAB28P51157 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
RAB28P51157 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RAB28P51157 TPR-209ENST00000613151 2478 ntTSL 5 BASIC16.83■□□□□ 0.28
RAB28P51157 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 AL135999.2-201ENST00000622438 1686 ntBASIC16.83■□□□□ 0.28
RAB28P51157 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RAB28P51157 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
RAB28P51157 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.83■□□□□ 0.28
RAB28P51157 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RAB28P51157 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB28P51157 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RAB28P51157 RPS2P28-201ENST00000314255 741 ntBASIC16.82■□□□□ 0.28
RAB28P51157 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB28P51157 MRPL3P1-201ENST00000400109 1033 ntBASIC16.82■□□□□ 0.28
RAB28P51157 RPS2P1-201ENST00000434010 821 ntBASIC16.82■□□□□ 0.28
RAB28P51157 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
RAB28P51157 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB28P51157 OR7E14P-202ENST00000530490 1290 ntBASIC16.82■□□□□ 0.28
RAB28P51157 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.82■□□□□ 0.28
RAB28P51157 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.82■□□□□ 0.28
RAB28P51157 AC139887.3-201ENST00000568585 713 ntBASIC16.82■□□□□ 0.28
RAB28P51157 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB28P51157 AC107918.4-202ENST00000641623 219 ntBASIC16.82■□□□□ 0.28
RAB28P51157 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB28P51157 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
RAB28P51157 AC097637.2-201ENST00000624096 1997 ntBASIC16.82■□□□□ 0.28
RAB28P51157 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB28P51157 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RAB28P51157 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RAB28P51157 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
RAB28P51157 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.82■□□□□ 0.28
RAB28P51157 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAB28P51157 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 BOC-212ENST00000485230 2173 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 AC016396.2-201ENST00000562575 1417 ntBASIC16.81■□□□□ 0.28
RAB28P51157 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
RAB28P51157 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RAB28P51157 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAB28P51157 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms