Protein–RNA interactions for Protein: P50876

RNF144A, E3 ubiquitin-protein ligase RNF144A, humanhuman

Predicted RBP Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF144AP50876 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
RNF144AP50876 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF144AP50876 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
RNF144AP50876 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF144AP50876 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.24■□□□□ 0.19
RNF144AP50876 TPSP2-201ENST00000561760 610 ntBASIC16.24■□□□□ 0.19
RNF144AP50876 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC16.24■□□□□ 0.19
RNF144AP50876 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.24■□□□□ 0.19
RNF144AP50876 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF144AP50876 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF144AP50876 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
RNF144AP50876 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
RNF144AP50876 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
RNF144AP50876 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF144AP50876 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF144AP50876 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF144AP50876 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 AC125634.1-201ENST00000438758 1403 ntBASIC16.23■□□□□ 0.19
RNF144AP50876 AD000864.1-201ENST00000624076 2295 ntBASIC16.23■□□□□ 0.19
RNF144AP50876 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF144AP50876 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
RNF144AP50876 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.23■□□□□ 0.19
RNF144AP50876 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
RNF144AP50876 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 AC069148.1-201ENST00000608741 768 ntBASIC16.23■□□□□ 0.19
RNF144AP50876 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
RNF144AP50876 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF144AP50876 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
RNF144AP50876 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNF144AP50876 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF144AP50876 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF144AP50876 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC16.23■□□□□ 0.19
RNF144AP50876 BX276092.7-203ENST00000637198 1536 ntBASIC16.23■□□□□ 0.19
RNF144AP50876 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 AL023806.1-201ENST00000603994 1649 ntBASIC16.23■□□□□ 0.19
RNF144AP50876 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNF144AP50876 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
RNF144AP50876 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF144AP50876 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
RNF144AP50876 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF144AP50876 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF144AP50876 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 UPK3BP1-201ENST00000428678 509 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 AC120057.1-201ENST00000483947 663 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF144AP50876 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF144AP50876 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 AC074051.2-201ENST00000565115 352 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF144AP50876 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 MIR3180-1-201ENST00000580374 94 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 MIR3180-3-201ENST00000584616 94 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF144AP50876 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RNF144AP50876 IL11-204ENST00000590625 1028 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.22■□□□□ 0.19
RNF144AP50876 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF144AP50876 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF144AP50876 LYSMD4-203ENST00000378904 2122 ntBASIC16.22■□□□□ 0.19
RNF144AP50876 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms