Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CENPFP49454 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.48■□□□□ 0.71
CENPFP49454 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPFP49454 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CENPFP49454 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.48■□□□□ 0.71
CENPFP49454 AC100757.3-201ENST00000622361 1406 ntBASIC19.48■□□□□ 0.71
CENPFP49454 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.48■□□□□ 0.71
CENPFP49454 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
CENPFP49454 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC19.48■□□□□ 0.71
CENPFP49454 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
CENPFP49454 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CENPFP49454 LINC00982-205ENST00000420957 435 ntBASIC19.47■□□□□ 0.71
CENPFP49454 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.47■□□□□ 0.71
CENPFP49454 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.47■□□□□ 0.71
CENPFP49454 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.47■□□□□ 0.71
CENPFP49454 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.47■□□□□ 0.71
CENPFP49454 AL590787.1-201ENST00000568856 1315 ntBASIC19.47■□□□□ 0.71
CENPFP49454 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
CENPFP49454 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 GIMAP3P-201ENST00000495150 836 ntBASIC19.47■□□□□ 0.71
CENPFP49454 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.47■□□□□ 0.71
CENPFP49454 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.47■□□□□ 0.71
CENPFP49454 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.47■□□□□ 0.71
CENPFP49454 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC19.47■□□□□ 0.71
CENPFP49454 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC19.47■□□□□ 0.71
CENPFP49454 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.47■□□□□ 0.71
CENPFP49454 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC19.47■□□□□ 0.71
CENPFP49454 SPCS2P4-201ENST00000436160 681 ntBASIC19.47■□□□□ 0.71
CENPFP49454 RBPMS2P1-201ENST00000437762 623 ntBASIC19.47■□□□□ 0.71
CENPFP49454 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC19.47■□□□□ 0.71
CENPFP49454 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.47■□□□□ 0.71
CENPFP49454 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.47■□□□□ 0.71
CENPFP49454 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CENPFP49454 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CENPFP49454 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.46■□□□□ 0.71
CENPFP49454 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.46■□□□□ 0.71
CENPFP49454 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
CENPFP49454 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.46■□□□□ 0.71
CENPFP49454 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CENPFP49454 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
CENPFP49454 TSSK5P-201ENST00000423978 907 ntBASIC19.46■□□□□ 0.71
CENPFP49454 DDX43P3-201ENST00000441064 443 ntBASIC19.46■□□□□ 0.71
CENPFP49454 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.46■□□□□ 0.71
CENPFP49454 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.46■□□□□ 0.71
CENPFP49454 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
CENPFP49454 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CENPFP49454 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CENPFP49454 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC19.46■□□□□ 0.7
CENPFP49454 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.46■□□□□ 0.7
CENPFP49454 SPDYE7P-202ENST00000420373 878 ntBASIC19.46■□□□□ 0.7
CENPFP49454 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.46■□□□□ 0.7
CENPFP49454 FAM86C2P-203ENST00000528684 1004 ntBASIC19.46■□□□□ 0.7
CENPFP49454 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.46■□□□□ 0.7
CENPFP49454 TMED1-207ENST00000591695 809 ntTSL 5 BASIC19.46■□□□□ 0.7
CENPFP49454 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC19.45■□□□□ 0.7
CENPFP49454 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.45■□□□□ 0.7
CENPFP49454 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.45■□□□□ 0.7
CENPFP49454 AC017083.2-201ENST00000608069 979 ntBASIC19.45■□□□□ 0.7
CENPFP49454 AC009118.2-201ENST00000613275 655 ntBASIC19.45■□□□□ 0.7
CENPFP49454 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.45■□□□□ 0.7
CENPFP49454 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
CENPFP49454 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.45■□□□□ 0.7
CENPFP49454 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC19.45■□□□□ 0.7
CENPFP49454 AC026150.2-201ENST00000564693 1156 ntBASIC19.45■□□□□ 0.7
CENPFP49454 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CENPFP49454 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CENPFP49454 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPFP49454 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CENPFP49454 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CENPFP49454 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC19.44■□□□□ 0.7
CENPFP49454 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.44■□□□□ 0.7
CENPFP49454 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC19.44■□□□□ 0.7
CENPFP49454 MIR4525-201ENST00000580000 75 ntBASIC19.44■□□□□ 0.7
CENPFP49454 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.44■□□□□ 0.7
CENPFP49454 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms