Protein–RNA interactions for Protein: P48788

TNNI2, Troponin I, fast skeletal muscle, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNNI2P48788 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.65■□□□□ 0.9
TNNI2P48788 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI2P48788 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI2P48788 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI2P48788 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
TNNI2P48788 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI2P48788 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI2P48788 REXO1L9P-201ENST00000604264 2108 ntBASIC20.65■□□□□ 0.9
TNNI2P48788 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TNNI2P48788 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.65■□□□□ 0.9
TNNI2P48788 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
TNNI2P48788 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.64■□□□□ 0.9
TNNI2P48788 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.64■□□□□ 0.9
TNNI2P48788 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
TNNI2P48788 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC20.64■□□□□ 0.9
TNNI2P48788 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
TNNI2P48788 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNNI2P48788 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TNNI2P48788 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.64■□□□□ 0.9
TNNI2P48788 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC20.64■□□□□ 0.89
TNNI2P48788 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TNNI2P48788 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC20.64■□□□□ 0.89
TNNI2P48788 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.64■□□□□ 0.89
TNNI2P48788 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC20.64■□□□□ 0.89
TNNI2P48788 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC20.64■□□□□ 0.89
TNNI2P48788 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC20.64■□□□□ 0.89
TNNI2P48788 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC20.64■□□□□ 0.89
TNNI2P48788 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.64■□□□□ 0.89
TNNI2P48788 AC027612.4-201ENST00000605371 583 ntBASIC20.64■□□□□ 0.89
TNNI2P48788 AC106028.4-201ENST00000614509 607 ntBASIC20.64■□□□□ 0.89
TNNI2P48788 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
TNNI2P48788 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TNNI2P48788 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
TNNI2P48788 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
TNNI2P48788 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TNNI2P48788 AL590787.1-201ENST00000568856 1315 ntBASIC20.63■□□□□ 0.89
TNNI2P48788 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC20.63■□□□□ 0.89
TNNI2P48788 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNNI2P48788 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 TSEN15P1-201ENST00000423257 515 ntBASIC20.63■□□□□ 0.89
TNNI2P48788 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC20.63■□□□□ 0.89
TNNI2P48788 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC20.63■□□□□ 0.89
TNNI2P48788 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC20.63■□□□□ 0.89
TNNI2P48788 AC068137.2-201ENST00000605408 478 ntBASIC20.63■□□□□ 0.89
TNNI2P48788 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.63■□□□□ 0.89
TNNI2P48788 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
TNNI2P48788 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TNNI2P48788 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.63■□□□□ 0.89
TNNI2P48788 HTR7P1-202ENST00000624664 4411 ntBASIC20.63■□□□□ 0.89
TNNI2P48788 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
TNNI2P48788 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TNNI2P48788 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
TNNI2P48788 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
TNNI2P48788 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TNNI2P48788 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.62■□□□□ 0.89
TNNI2P48788 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TNNI2P48788 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC20.62■□□□□ 0.89
TNNI2P48788 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC20.62■□□□□ 0.89
TNNI2P48788 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.62■□□□□ 0.89
TNNI2P48788 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.62■□□□□ 0.89
TNNI2P48788 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TNNI2P48788 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms