Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ARCN1P48444 SKP2-204ENST00000508514 821 ntTSL 3 BASIC17.47■□□□□ 0.39
ARCN1P48444 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.47■□□□□ 0.39
ARCN1P48444 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.47■□□□□ 0.39
ARCN1P48444 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.47■□□□□ 0.39
ARCN1P48444 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC17.47■□□□□ 0.39
ARCN1P48444 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.47■□□□□ 0.39
ARCN1P48444 AL121894.2-201ENST00000602977 491 ntBASIC17.47■□□□□ 0.39
ARCN1P48444 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ARCN1P48444 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.47■□□□□ 0.39
ARCN1P48444 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARCN1P48444 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.47■□□□□ 0.39
ARCN1P48444 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
ARCN1P48444 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARCN1P48444 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARCN1P48444 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
ARCN1P48444 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
ARCN1P48444 AC046185.3-201ENST00000623228 1824 ntBASIC17.47■□□□□ 0.39
ARCN1P48444 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
ARCN1P48444 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
ARCN1P48444 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.46■□□□□ 0.39
ARCN1P48444 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ARCN1P48444 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ARCN1P48444 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ARCN1P48444 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.46■□□□□ 0.39
ARCN1P48444 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.46■□□□□ 0.39
ARCN1P48444 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.46■□□□□ 0.39
ARCN1P48444 VENTXP7-201ENST00000475503 772 ntBASIC17.46■□□□□ 0.39
ARCN1P48444 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.46■□□□□ 0.39
ARCN1P48444 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.46■□□□□ 0.39
ARCN1P48444 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC17.46■□□□□ 0.39
ARCN1P48444 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
ARCN1P48444 AC138894.3-201ENST00000603787 634 ntBASIC17.46■□□□□ 0.39
ARCN1P48444 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.46■□□□□ 0.39
ARCN1P48444 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ARCN1P48444 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ARCN1P48444 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ARCN1P48444 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ARCN1P48444 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ARCN1P48444 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
ARCN1P48444 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 AC093525.9-201ENST00000624961 1746 ntBASIC17.45■□□□□ 0.38
ARCN1P48444 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.45■□□□□ 0.38
ARCN1P48444 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 AC104819.1-201ENST00000504587 486 ntBASIC17.45■□□□□ 0.38
ARCN1P48444 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC17.45■□□□□ 0.38
ARCN1P48444 KRT126P-201ENST00000549467 1181 ntBASIC17.45■□□□□ 0.38
ARCN1P48444 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 AD001527.2-201ENST00000622994 785 ntBASIC17.45■□□□□ 0.38
ARCN1P48444 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
ARCN1P48444 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
ARCN1P48444 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.45■□□□□ 0.38
ARCN1P48444 AC060834.1-201ENST00000443027 2032 ntBASIC17.45■□□□□ 0.38
ARCN1P48444 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ARCN1P48444 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.44■□□□□ 0.38
ARCN1P48444 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
ARCN1P48444 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARCN1P48444 TP73-AS1-210ENST00000637775 1455 ntBASIC17.44■□□□□ 0.38
ARCN1P48444 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARCN1P48444 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ARCN1P48444 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms