Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.51■□□□□ 0.55
BRCC3P46736 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BRCC3P46736 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.51■□□□□ 0.55
BRCC3P46736 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 IGLL3P-201ENST00000412472 434 ntBASIC18.51■□□□□ 0.55
BRCC3P46736 GPX1P2-201ENST00000429271 606 ntBASIC18.51■□□□□ 0.55
BRCC3P46736 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.51■□□□□ 0.55
BRCC3P46736 AC112482.1-201ENST00000492080 688 ntBASIC18.51■□□□□ 0.55
BRCC3P46736 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.51■□□□□ 0.55
BRCC3P46736 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.51■□□□□ 0.55
BRCC3P46736 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.51■□□□□ 0.55
BRCC3P46736 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.51■□□□□ 0.55
BRCC3P46736 AC092865.6-201ENST00000642101 219 ntBASIC18.51■□□□□ 0.55
BRCC3P46736 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
BRCC3P46736 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
BRCC3P46736 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
BRCC3P46736 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.51■□□□□ 0.55
BRCC3P46736 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
BRCC3P46736 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRCC3P46736 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRCC3P46736 LYSMD4-203ENST00000378904 2122 ntBASIC18.5■□□□□ 0.55
BRCC3P46736 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BRCC3P46736 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.5■□□□□ 0.55
BRCC3P46736 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
BRCC3P46736 PI4KAP1-204ENST00000612579 1703 ntBASIC18.5■□□□□ 0.55
BRCC3P46736 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
BRCC3P46736 MRPL20P1-201ENST00000400819 433 ntBASIC18.5■□□□□ 0.55
BRCC3P46736 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.5■□□□□ 0.55
BRCC3P46736 AC004832.2-201ENST00000426397 482 ntBASIC18.5■□□□□ 0.55
BRCC3P46736 PRSS29P-201ENST00000440800 595 ntBASIC18.5■□□□□ 0.55
BRCC3P46736 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.5■□□□□ 0.55
BRCC3P46736 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 AC002347.1-201ENST00000569543 541 ntBASIC18.5■□□□□ 0.55
BRCC3P46736 OR7E47P-204ENST00000575924 449 ntBASIC18.5■□□□□ 0.55
BRCC3P46736 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.5■□□□□ 0.55
BRCC3P46736 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.5■□□□□ 0.55
BRCC3P46736 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRCC3P46736 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.5■□□□□ 0.55
BRCC3P46736 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
BRCC3P46736 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRCC3P46736 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.5■□□□□ 0.55
BRCC3P46736 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
BRCC3P46736 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.49■□□□□ 0.55
BRCC3P46736 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
BRCC3P46736 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.49■□□□□ 0.55
BRCC3P46736 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.49■□□□□ 0.55
BRCC3P46736 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.49■□□□□ 0.55
BRCC3P46736 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
BRCC3P46736 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRCC3P46736 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.49■□□□□ 0.55
BRCC3P46736 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
BRCC3P46736 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.49■□□□□ 0.55
BRCC3P46736 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.49■□□□□ 0.55
BRCC3P46736 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.49■□□□□ 0.55
BRCC3P46736 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.49■□□□□ 0.55
BRCC3P46736 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
BRCC3P46736 BCL2-203ENST00000589955 5011 ntBASIC18.48■□□□□ 0.55
BRCC3P46736 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.48■□□□□ 0.55
BRCC3P46736 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
BRCC3P46736 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRCC3P46736 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRCC3P46736 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRCC3P46736 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.48■□□□□ 0.55
BRCC3P46736 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
BRCC3P46736 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.48■□□□□ 0.55
BRCC3P46736 HTR7P1-202ENST00000624664 4411 ntBASIC18.48■□□□□ 0.55
BRCC3P46736 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
BRCC3P46736 SLC25A6P5-201ENST00000435663 894 ntBASIC18.48■□□□□ 0.55
BRCC3P46736 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.48■□□□□ 0.55
BRCC3P46736 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms