Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.32□□□□□ -0.12
NKX2-1P43699 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 AC116562.2-201ENST00000507042 360 ntBASIC14.32□□□□□ -0.12
NKX2-1P43699 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
NKX2-1P43699 AP003041.3-201ENST00000527151 707 ntBASIC14.32□□□□□ -0.12
NKX2-1P43699 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 ETFA-216ENST00000560726 942 ntTSL 3 BASIC14.32□□□□□ -0.12
NKX2-1P43699 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NKX2-1P43699 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NKX2-1P43699 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC14.32□□□□□ -0.12
NKX2-1P43699 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-1P43699 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-1P43699 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-1P43699 PCDHA1-201ENST00000378133 2726 ntBASIC14.31□□□□□ -0.12
NKX2-1P43699 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-1P43699 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 ILF2-202ENST00000368681 726 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-1P43699 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NKX2-1P43699 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-1P43699 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-1P43699 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.31□□□□□ -0.12
NKX2-1P43699 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.31□□□□□ -0.12
NKX2-1P43699 CD177P1-201ENST00000606252 935 ntBASIC14.31□□□□□ -0.12
NKX2-1P43699 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC14.31□□□□□ -0.12
NKX2-1P43699 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-1P43699 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.31□□□□□ -0.12
NKX2-1P43699 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 LINC02199-201ENST00000506655 2702 ntBASIC14.31□□□□□ -0.12
NKX2-1P43699 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NKX2-1P43699 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-1P43699 LINC01311-201ENST00000565162 1445 ntBASIC14.31□□□□□ -0.12
NKX2-1P43699 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
NKX2-1P43699 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NKX2-1P43699 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.31□□□□□ -0.12
NKX2-1P43699 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NKX2-1P43699 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NKX2-1P43699 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NKX2-1P43699 SAPCD2P4-201ENST00000424595 1171 ntBASIC14.3□□□□□ -0.12
NKX2-1P43699 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.3□□□□□ -0.12
NKX2-1P43699 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC14.3□□□□□ -0.12
NKX2-1P43699 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 TSPY17P-201ENST00000450329 467 ntBASIC14.3□□□□□ -0.12
NKX2-1P43699 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC14.3□□□□□ -0.12
NKX2-1P43699 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC14.3□□□□□ -0.12
NKX2-1P43699 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC14.3□□□□□ -0.12
NKX2-1P43699 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms