Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF9P41273 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.84■□□□□ 0.61
TNFSF9P41273 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.84■□□□□ 0.61
TNFSF9P41273 AC098831.1-202ENST00000438821 336 ntBASIC18.84■□□□□ 0.61
TNFSF9P41273 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFSF9P41273 AC093909.1-201ENST00000504731 1122 ntBASIC18.84■□□□□ 0.61
TNFSF9P41273 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.84■□□□□ 0.61
TNFSF9P41273 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF9P41273 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF9P41273 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.84■□□□□ 0.61
TNFSF9P41273 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TNFSF9P41273 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
TNFSF9P41273 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.84■□□□□ 0.61
TNFSF9P41273 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF9P41273 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF9P41273 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF9P41273 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.83■□□□□ 0.61
TNFSF9P41273 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.83■□□□□ 0.61
TNFSF9P41273 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF9P41273 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
TNFSF9P41273 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF9P41273 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF9P41273 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TNFSF9P41273 INIP-202ENST00000374236 874 ntTSL 2 BASIC18.83■□□□□ 0.6
TNFSF9P41273 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.83■□□□□ 0.6
TNFSF9P41273 IGHV3-22-201ENST00000520721 359 ntBASIC18.83■□□□□ 0.6
TNFSF9P41273 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.83■□□□□ 0.6
TNFSF9P41273 AC006557.2-201ENST00000592985 1240 ntBASIC18.83■□□□□ 0.6
TNFSF9P41273 AL353135.1-201ENST00000606729 504 ntBASIC18.83■□□□□ 0.6
TNFSF9P41273 AL139424.1-201ENST00000607572 797 ntBASIC18.83■□□□□ 0.6
TNFSF9P41273 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
TNFSF9P41273 BX640515.1-201ENST00000617215 977 ntBASIC18.83■□□□□ 0.6
TNFSF9P41273 AC117500.6-201ENST00000624871 588 ntBASIC18.83■□□□□ 0.6
TNFSF9P41273 AL138688.1-201ENST00000624851 1594 ntBASIC18.83■□□□□ 0.6
TNFSF9P41273 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TNFSF9P41273 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF9P41273 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF9P41273 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF9P41273 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TNFSF9P41273 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF9P41273 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TNFSF9P41273 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TNFSF9P41273 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF9P41273 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFSF9P41273 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.82■□□□□ 0.6
TNFSF9P41273 AL022342.1-201ENST00000400363 863 ntBASIC18.82■□□□□ 0.6
TNFSF9P41273 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFSF9P41273 RPS29-206ENST00000557111 488 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF9P41273 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.82■□□□□ 0.6
TNFSF9P41273 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.82■□□□□ 0.6
TNFSF9P41273 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF9P41273 AL356488.2-201ENST00000602755 427 ntBASIC18.82■□□□□ 0.6
TNFSF9P41273 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TNFSF9P41273 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.82■□□□□ 0.6
TNFSF9P41273 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TNFSF9P41273 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
TNFSF9P41273 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF9P41273 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TNFSF9P41273 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TNFSF9P41273 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 CROCCP2-202ENST00000412962 2773 ntBASIC18.81■□□□□ 0.6
TNFSF9P41273 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF9P41273 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
TNFSF9P41273 ACTG1P4-201ENST00000425123 1122 ntBASIC18.81■□□□□ 0.6
TNFSF9P41273 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.81■□□□□ 0.6
TNFSF9P41273 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TNFSF9P41273 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.81■□□□□ 0.6
TNFSF9P41273 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.81■□□□□ 0.6
TNFSF9P41273 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.81■□□□□ 0.6
TNFSF9P41273 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms