Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.94■□□□□ 0.3
HNF4AP41235 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 KRT17P6-201ENST00000453795 1220 ntBASIC16.94■□□□□ 0.3
HNF4AP41235 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.94■□□□□ 0.3
HNF4AP41235 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.94■□□□□ 0.3
HNF4AP41235 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.94■□□□□ 0.3
HNF4AP41235 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.94■□□□□ 0.3
HNF4AP41235 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.94■□□□□ 0.3
HNF4AP41235 AC009533.2-201ENST00000543664 586 ntBASIC16.94■□□□□ 0.3
HNF4AP41235 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC16.94■□□□□ 0.3
HNF4AP41235 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.94■□□□□ 0.3
HNF4AP41235 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.94■□□□□ 0.3
HNF4AP41235 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.94■□□□□ 0.3
HNF4AP41235 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.94■□□□□ 0.3
HNF4AP41235 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.94■□□□□ 0.3
HNF4AP41235 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
HNF4AP41235 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
HNF4AP41235 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.94■□□□□ 0.3
HNF4AP41235 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.94■□□□□ 0.3
HNF4AP41235 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HNF4AP41235 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.93■□□□□ 0.3
HNF4AP41235 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNF4AP41235 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HNF4AP41235 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.93■□□□□ 0.3
HNF4AP41235 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HNF4AP41235 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNF4AP41235 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.93■□□□□ 0.3
HNF4AP41235 AC104819.1-201ENST00000504587 486 ntBASIC16.93■□□□□ 0.3
HNF4AP41235 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.93■□□□□ 0.3
HNF4AP41235 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HNF4AP41235 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
HNF4AP41235 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
HNF4AP41235 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
HNF4AP41235 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
HNF4AP41235 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
HNF4AP41235 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
HNF4AP41235 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.92■□□□□ 0.3
HNF4AP41235 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
HNF4AP41235 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.92■□□□□ 0.3
HNF4AP41235 NSUN5P1-202ENST00000421140 1535 ntBASIC16.92■□□□□ 0.3
HNF4AP41235 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.92■□□□□ 0.3
HNF4AP41235 NSUN5P2-203ENST00000457352 1529 ntBASIC16.92■□□□□ 0.3
HNF4AP41235 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
HNF4AP41235 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
HNF4AP41235 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.92■□□□□ 0.3
HNF4AP41235 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.92■□□□□ 0.3
HNF4AP41235 AC019129.2-201ENST00000609837 1235 ntBASIC16.92■□□□□ 0.3
HNF4AP41235 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.92■□□□□ 0.3
HNF4AP41235 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC16.92■□□□□ 0.3
HNF4AP41235 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
HNF4AP41235 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.91■□□□□ 0.3
HNF4AP41235 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.91■□□□□ 0.3
HNF4AP41235 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
HNF4AP41235 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.91■□□□□ 0.3
HNF4AP41235 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HNF4AP41235 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.91■□□□□ 0.3
HNF4AP41235 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.91■□□□□ 0.3
HNF4AP41235 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.91■□□□□ 0.3
HNF4AP41235 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HNF4AP41235 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms