Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 HMGA1P5-201ENST00000412453 271 ntBASIC15.22■□□□□ 0.03
GDNFP39905 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
GDNFP39905 CLN6-221ENST00000637494 765 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.22■□□□□ 0.03
GDNFP39905 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.22■□□□□ 0.03
GDNFP39905 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
GDNFP39905 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
GDNFP39905 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
GDNFP39905 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 KRT18P22-201ENST00000402024 1347 ntBASIC15.21■□□□□ 0.03
GDNFP39905 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.21■□□□□ 0.03
GDNFP39905 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.21■□□□□ 0.03
GDNFP39905 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
GDNFP39905 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC15.21■□□□□ 0.03
GDNFP39905 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.21■□□□□ 0.03
GDNFP39905 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GDNFP39905 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.21■□□□□ 0.03
GDNFP39905 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.21■□□□□ 0.03
GDNFP39905 AC012306.2-201ENST00000609350 630 ntBASIC15.21■□□□□ 0.03
GDNFP39905 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.21■□□□□ 0.03
GDNFP39905 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
GDNFP39905 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
GDNFP39905 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
GDNFP39905 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GDNFP39905 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
GDNFP39905 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GDNFP39905 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
GDNFP39905 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
GDNFP39905 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
GDNFP39905 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC15.21■□□□□ 0.02
GDNFP39905 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.2■□□□□ 0.02
GDNFP39905 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC15.2■□□□□ 0.02
GDNFP39905 AC022898.2-201ENST00000616822 1312 ntBASIC15.2■□□□□ 0.02
GDNFP39905 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
GDNFP39905 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC15.2■□□□□ 0.02
GDNFP39905 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
GDNFP39905 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms