Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
PDE6BP35913 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC21.34■■□□□ 1.01
PDE6BP35913 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC21.34■■□□□ 1.01
PDE6BP35913 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.33■■□□□ 1.01
PDE6BP35913 AC120498.9-201ENST00000339021 3867 ntBASIC21.33■■□□□ 1.01
PDE6BP35913 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.33■■□□□ 1.01
PDE6BP35913 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
PDE6BP35913 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC21.33■■□□□ 1.01
PDE6BP35913 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 MIR661-201ENST00000384842 89 ntBASIC21.33■■□□□ 1.01
PDE6BP35913 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.33■■□□□ 1.01
PDE6BP35913 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.33■■□□□ 1.01
PDE6BP35913 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC21.33■■□□□ 1.01
PDE6BP35913 FAM207CP-201ENST00000443486 507 ntBASIC21.33■■□□□ 1.01
PDE6BP35913 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.33■■□□□ 1.01
PDE6BP35913 BAD-207ENST00000544785 525 ntTSL 3 BASIC21.33■■□□□ 1.01
PDE6BP35913 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.33■■□□□ 1.01
PDE6BP35913 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC21.33■■□□□ 1.01
PDE6BP35913 INO80E-210ENST00000567705 880 ntTSL 3 BASIC21.33■■□□□ 1.01
PDE6BP35913 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.33■■□□□ 1.01
PDE6BP35913 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
PDE6BP35913 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
PDE6BP35913 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.33■■□□□ 1
PDE6BP35913 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.33■■□□□ 1
PDE6BP35913 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDE6BP35913 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC21.32■■□□□ 1
PDE6BP35913 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
PDE6BP35913 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDE6BP35913 EDF1-203ENST00000371649 790 ntTSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC21.32■■□□□ 1
PDE6BP35913 SPCS2P4-201ENST00000436160 681 ntBASIC21.32■■□□□ 1
PDE6BP35913 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 UGT1A2P-201ENST00000454886 866 ntBASIC21.32■■□□□ 1
PDE6BP35913 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.32■■□□□ 1
PDE6BP35913 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC21.32■■□□□ 1
PDE6BP35913 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 CD7-202ENST00000578509 925 ntTSL 3 BASIC21.32■■□□□ 1
PDE6BP35913 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC21.32■■□□□ 1
PDE6BP35913 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.32■■□□□ 1
PDE6BP35913 FO538757.1-201ENST00000623083 1397 ntBASIC21.32■■□□□ 1
PDE6BP35913 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDE6BP35913 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
PDE6BP35913 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
PDE6BP35913 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.31■■□□□ 1
PDE6BP35913 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.31■■□□□ 1
PDE6BP35913 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.31■■□□□ 1
PDE6BP35913 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 GK-202ENST00000378941 458 ntTSL 3 BASIC21.31■■□□□ 1
PDE6BP35913 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 IGHV3-62-201ENST00000520057 340 ntBASIC21.31■■□□□ 1
PDE6BP35913 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.31■■□□□ 1
PDE6BP35913 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC21.31■■□□□ 1
PDE6BP35913 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC21.31■■□□□ 1
PDE6BP35913 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC21.31■■□□□ 1
PDE6BP35913 AP000997.3-201ENST00000623333 2250 ntBASIC21.31■■□□□ 1
PDE6BP35913 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC21.31■■□□□ 1
PDE6BP35913 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
PDE6BP35913 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE6BP35913 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
PDE6BP35913 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC21.3■■□□□ 1
PDE6BP35913 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE6BP35913 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
PDE6BP35913 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
PDE6BP35913 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
PDE6BP35913 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDE6BP35913 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.3■■□□□ 1
PDE6BP35913 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
PDE6BP35913 KRT8P23-201ENST00000560090 1207 ntBASIC21.3■■□□□ 1
PDE6BP35913 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.3■■□□□ 1
PDE6BP35913 LINC02560-201ENST00000596379 459 ntBASIC21.3■■□□□ 1
PDE6BP35913 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC21.3■■□□□ 1
PDE6BP35913 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21.3■■□□□ 1
PDE6BP35913 AC008761.3-201ENST00000624803 892 ntBASIC21.3■■□□□ 1
PDE6BP35913 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC21.3■■□□□ 1
PDE6BP35913 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
PDE6BP35913 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC21.3■■□□□ 1
PDE6BP35913 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.29■■□□□ 1
PDE6BP35913 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDE6BP35913 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC21.29■■□□□ 1
PDE6BP35913 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC21.29■■□□□ 1
PDE6BP35913 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.29■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms