Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
KRT20P35900 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRT20P35900 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT20P35900 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT20P35900 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT20P35900 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT20P35900 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC16.63■□□□□ 0.25
KRT20P35900 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.63■□□□□ 0.25
KRT20P35900 KRT8P26-201ENST00000534154 1276 ntBASIC16.63■□□□□ 0.25
KRT20P35900 AC090616.6-201ENST00000582640 721 ntBASIC16.63■□□□□ 0.25
KRT20P35900 IGHV3-41-201ENST00000613121 348 ntBASIC16.63■□□□□ 0.25
KRT20P35900 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.63■□□□□ 0.25
KRT20P35900 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
KRT20P35900 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
KRT20P35900 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC16.63■□□□□ 0.25
KRT20P35900 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 AL118508.1-201ENST00000613502 2345 ntBASIC16.63■□□□□ 0.25
KRT20P35900 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
KRT20P35900 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
KRT20P35900 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
KRT20P35900 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT20P35900 DUTP2-201ENST00000519164 463 ntBASIC16.62■□□□□ 0.25
KRT20P35900 PTK2-216ENST00000519881 863 ntTSL 3 BASIC16.62■□□□□ 0.25
KRT20P35900 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT20P35900 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.62■□□□□ 0.25
KRT20P35900 AL358472.4-201ENST00000633140 710 ntBASIC16.62■□□□□ 0.25
KRT20P35900 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 AC132938.6-201ENST00000623828 1655 ntBASIC16.62■□□□□ 0.25
KRT20P35900 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.62■□□□□ 0.25
KRT20P35900 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.62■□□□□ 0.25
KRT20P35900 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
KRT20P35900 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
KRT20P35900 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT20P35900 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
KRT20P35900 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.61■□□□□ 0.25
KRT20P35900 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT20P35900 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT20P35900 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC16.61■□□□□ 0.25
KRT20P35900 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT20P35900 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.61■□□□□ 0.25
KRT20P35900 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT20P35900 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
KRT20P35900 AC116407.2-201ENST00000613639 860 ntBASIC16.61■□□□□ 0.25
KRT20P35900 AC116407.4-201ENST00000623319 1061 ntBASIC16.61■□□□□ 0.25
KRT20P35900 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
KRT20P35900 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms