Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HOXC8P31273 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXC8P31273 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HOXC8P31273 MIR770-201ENST00000390219 98 ntBASIC18.86■□□□□ 0.61
HOXC8P31273 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXC8P31273 GATB-205ENST00000508611 605 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 KRT8P48-201ENST00000515599 1220 ntBASIC18.86■□□□□ 0.61
HOXC8P31273 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXC8P31273 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.86■□□□□ 0.61
HOXC8P31273 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.86■□□□□ 0.61
HOXC8P31273 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
HOXC8P31273 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
HOXC8P31273 AC135050.7-201ENST00000624508 2218 ntBASIC18.86■□□□□ 0.61
HOXC8P31273 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC8P31273 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC8P31273 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC8P31273 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC18.85■□□□□ 0.61
HOXC8P31273 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC8P31273 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC8P31273 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HOXC8P31273 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC8P31273 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.85■□□□□ 0.61
HOXC8P31273 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXC8P31273 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC8P31273 FAM86C2P-203ENST00000528684 1004 ntBASIC18.85■□□□□ 0.61
HOXC8P31273 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC18.85■□□□□ 0.61
HOXC8P31273 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC8P31273 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC8P31273 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC8P31273 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC8P31273 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC8P31273 AC012317.2-201ENST00000623305 2251 ntBASIC18.84■□□□□ 0.61
HOXC8P31273 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC8P31273 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC8P31273 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 HMGA1P7-201ENST00000406908 502 ntBASIC18.84■□□□□ 0.61
HOXC8P31273 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC8P31273 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXC8P31273 SPCS2P1-201ENST00000561636 679 ntBASIC18.84■□□□□ 0.61
HOXC8P31273 AC005412.3-201ENST00000580309 715 ntBASIC18.84■□□□□ 0.61
HOXC8P31273 BSG-214ENST00000614867 960 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXC8P31273 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HOXC8P31273 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXC8P31273 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC8P31273 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC8P31273 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC8P31273 AL355312.1-201ENST00000407115 2176 ntBASIC18.83■□□□□ 0.61
HOXC8P31273 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC8P31273 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC8P31273 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC8P31273 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
HOXC8P31273 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.61
HOXC8P31273 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
HOXC8P31273 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC8P31273 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC8P31273 AL671277.1-201ENST00000429656 993 ntBASIC18.83■□□□□ 0.6
HOXC8P31273 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXC8P31273 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC8P31273 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC18.83■□□□□ 0.6
HOXC8P31273 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC8P31273 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC18.83■□□□□ 0.6
HOXC8P31273 AC243562.1-201ENST00000560672 389 ntBASIC18.83■□□□□ 0.6
HOXC8P31273 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXC8P31273 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC8P31273 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC8P31273 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC8P31273 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms