Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA6P31267 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA6P31267 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA6P31267 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA6P31267 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA6P31267 CRB3P1-201ENST00000449338 276 ntBASIC17.07■□□□□ 0.32
HOXA6P31267 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 AC069120.2-201ENST00000524091 540 ntBASIC17.07■□□□□ 0.32
HOXA6P31267 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC17.07■□□□□ 0.32
HOXA6P31267 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 SSH2-211ENST00000590153 570 ntTSL 4 BASIC17.07■□□□□ 0.32
HOXA6P31267 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA6P31267 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA6P31267 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA6P31267 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.07■□□□□ 0.32
HOXA6P31267 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXA6P31267 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC17.07■□□□□ 0.32
HOXA6P31267 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXA6P31267 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
HOXA6P31267 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
HOXA6P31267 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXA6P31267 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXA6P31267 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC17.06■□□□□ 0.32
HOXA6P31267 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 AC097493.3-201ENST00000509725 367 ntBASIC17.06■□□□□ 0.32
HOXA6P31267 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.06■□□□□ 0.32
HOXA6P31267 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.06■□□□□ 0.32
HOXA6P31267 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 AL390754.1-201ENST00000619088 582 ntBASIC17.06■□□□□ 0.32
HOXA6P31267 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
HOXA6P31267 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.06■□□□□ 0.32
HOXA6P31267 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
HOXA6P31267 AL020996.1-203ENST00000536896 2307 ntBASIC17.05■□□□□ 0.32
HOXA6P31267 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA6P31267 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
HOXA6P31267 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXA6P31267 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
HOXA6P31267 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA6P31267 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA6P31267 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
HOXA6P31267 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXA6P31267 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
HOXA6P31267 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA6P31267 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA6P31267 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC17.05■□□□□ 0.32
HOXA6P31267 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC17.05■□□□□ 0.32
HOXA6P31267 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
HOXA6P31267 COQ4-205ENST00000609948 956 ntTSL 2 BASIC17.05■□□□□ 0.32
HOXA6P31267 AL139327.4-201ENST00000612362 153 ntBASIC17.05■□□□□ 0.32
HOXA6P31267 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 UXT-AS1-201ENST00000590504 1525 ntBASIC17.05■□□□□ 0.32
HOXA6P31267 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
HOXA6P31267 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA6P31267 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.04■□□□□ 0.32
HOXA6P31267 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA6P31267 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA6P31267 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA6P31267 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
HOXA6P31267 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA6P31267 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
HOXA6P31267 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms