Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 ESPNP-201ENST00000270691 2015 ntBASIC22.55■■□□□ 1.2
RXRBP28702 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
RXRBP28702 COBL-210ENST00000632460 1941 ntTSL 5 BASIC22.55■■□□□ 1.2
RXRBP28702 BTBD7P1-201ENST00000447253 1453 ntBASIC22.55■■□□□ 1.2
RXRBP28702 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RXRBP28702 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC22.55■■□□□ 1.2
RXRBP28702 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RXRBP28702 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC22.55■■□□□ 1.2
RXRBP28702 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
RXRBP28702 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC22.55■■□□□ 1.2
RXRBP28702 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 CD81-207ENST00000481687 890 ntTSL 2 BASIC22.55■■□□□ 1.2
RXRBP28702 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC22.55■■□□□ 1.2
RXRBP28702 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC22.55■■□□□ 1.2
RXRBP28702 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC22.55■■□□□ 1.2
RXRBP28702 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
RXRBP28702 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC22.55■■□□□ 1.2
RXRBP28702 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC22.55■■□□□ 1.2
RXRBP28702 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 AC012569.1-201ENST00000591191 1524 ntBASIC22.55■■□□□ 1.2
RXRBP28702 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
RXRBP28702 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC22.55■■□□□ 1.2
RXRBP28702 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
RXRBP28702 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
RXRBP28702 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 AC093010.1-201ENST00000473625 1624 ntBASIC22.54■■□□□ 1.2
RXRBP28702 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.54■■□□□ 1.2
RXRBP28702 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
RXRBP28702 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
RXRBP28702 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RXRBP28702 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC22.54■■□□□ 1.2
RXRBP28702 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC22.54■■□□□ 1.2
RXRBP28702 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC22.54■■□□□ 1.2
RXRBP28702 PPA1-206ENST00000625364 644 ntTSL 5 BASIC22.54■■□□□ 1.2
RXRBP28702 AC125437.2-201ENST00000625180 2167 ntBASIC22.54■■□□□ 1.2
RXRBP28702 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
RXRBP28702 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.54■■□□□ 1.2
RXRBP28702 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
RXRBP28702 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RXRBP28702 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.53■■□□□ 1.2
RXRBP28702 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.53■■□□□ 1.2
RXRBP28702 AL035456.1-201ENST00000456064 1369 ntBASIC22.53■■□□□ 1.2
RXRBP28702 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RXRBP28702 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RXRBP28702 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.53■■□□□ 1.2
RXRBP28702 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RXRBP28702 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
RXRBP28702 RPL37AP1-201ENST00000412502 279 ntBASIC22.53■■□□□ 1.2
RXRBP28702 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC22.53■■□□□ 1.2
RXRBP28702 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC22.53■■□□□ 1.2
RXRBP28702 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
RXRBP28702 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC22.53■■□□□ 1.2
RXRBP28702 AC007389.4-201ENST00000454674 793 ntBASIC22.53■■□□□ 1.2
RXRBP28702 AC002558.1-201ENST00000488906 803 ntBASIC22.53■■□□□ 1.2
RXRBP28702 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC22.53■■□□□ 1.2
RXRBP28702 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC22.53■■□□□ 1.2
RXRBP28702 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC22.53■■□□□ 1.2
RXRBP28702 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC22.53■■□□□ 1.2
RXRBP28702 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
RXRBP28702 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
RXRBP28702 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
RXRBP28702 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 CETN4P-206ENST00000642099 2168 ntBASIC22.52■■□□□ 1.2
RXRBP28702 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
RXRBP28702 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC22.52■■□□□ 1.2
RXRBP28702 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC22.52■■□□□ 1.2
RXRBP28702 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC22.52■■□□□ 1.2
RXRBP28702 AL138918.1-201ENST00000568306 659 ntBASIC22.52■■□□□ 1.2
RXRBP28702 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC22.52■■□□□ 1.2
RXRBP28702 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
RXRBP28702 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
RXRBP28702 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
RXRBP28702 SLC7A15P-201ENST00000424028 1363 ntBASIC22.51■■□□□ 1.19
RXRBP28702 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC22.51■■□□□ 1.19
RXRBP28702 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
RXRBP28702 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms