Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 PCDHB17P-201ENST00000539533 2393 ntBASIC16.26■□□□□ 0.19
NR4A1P22736 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 TMPOP1-202ENST00000424642 1267 ntBASIC16.26■□□□□ 0.19
NR4A1P22736 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.26■□□□□ 0.19
NR4A1P22736 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.26■□□□□ 0.19
NR4A1P22736 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 RN7SL850P-201ENST00000579959 291 ntBASIC16.26■□□□□ 0.19
NR4A1P22736 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
NR4A1P22736 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
NR4A1P22736 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.26■□□□□ 0.19
NR4A1P22736 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NR4A1P22736 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A1P22736 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A1P22736 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
NR4A1P22736 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A1P22736 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.25■□□□□ 0.19
NR4A1P22736 KRT18P57-201ENST00000443599 1254 ntBASIC16.25■□□□□ 0.19
NR4A1P22736 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A1P22736 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.25■□□□□ 0.19
NR4A1P22736 AL138966.2-201ENST00000621997 464 ntBASIC16.25■□□□□ 0.19
NR4A1P22736 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A1P22736 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NR4A1P22736 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A1P22736 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
NR4A1P22736 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A1P22736 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
NR4A1P22736 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.25■□□□□ 0.19
NR4A1P22736 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.25■□□□□ 0.19
NR4A1P22736 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
NR4A1P22736 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A1P22736 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
NR4A1P22736 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.24■□□□□ 0.19
NR4A1P22736 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A1P22736 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.24■□□□□ 0.19
NR4A1P22736 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
NR4A1P22736 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms