Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL3L1P16619 AL450487.1-201ENST00000426799 995 ntBASIC14.41□□□□□ -0.1
CCL3L1P16619 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL3L1P16619 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 STK19B-204ENST00000512515 211 ntBASIC14.41□□□□□ -0.1
CCL3L1P16619 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL3L1P16619 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
CCL3L1P16619 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL3L1P16619 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL3L1P16619 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.41□□□□□ -0.1
CCL3L1P16619 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL3L1P16619 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL3L1P16619 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL3L1P16619 AP000867.4-201ENST00000641616 219 ntBASIC14.41□□□□□ -0.1
CCL3L1P16619 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 AL138688.1-201ENST00000624851 1594 ntBASIC14.41□□□□□ -0.1
CCL3L1P16619 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL3L1P16619 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
CCL3L1P16619 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.41□□□□□ -0.1
CCL3L1P16619 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
CCL3L1P16619 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CCL3L1P16619 AP005117.1-201ENST00000584346 1413 ntBASIC14.41□□□□□ -0.1
CCL3L1P16619 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.41□□□□□ -0.1
CCL3L1P16619 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 AC141586.5-201ENST00000624546 2050 ntBASIC14.4□□□□□ -0.1
CCL3L1P16619 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 SOD2-201ENST00000337404 991 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL3L1P16619 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.4□□□□□ -0.1
CCL3L1P16619 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.4□□□□□ -0.1
CCL3L1P16619 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.4□□□□□ -0.1
CCL3L1P16619 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 REXO1L6P-202ENST00000619970 1078 ntBASIC14.4□□□□□ -0.1
CCL3L1P16619 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
CCL3L1P16619 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
CCL3L1P16619 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.4□□□□□ -0.1
CCL3L1P16619 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 AC139713.2-201ENST00000641328 2723 ntBASIC14.4□□□□□ -0.1
CCL3L1P16619 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CCL3L1P16619 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
CCL3L1P16619 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CCL3L1P16619 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 CROCCP2-202ENST00000412962 2773 ntBASIC14.39□□□□□ -0.11
CCL3L1P16619 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CCL3L1P16619 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC14.39□□□□□ -0.11
CCL3L1P16619 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 AC046185.3-201ENST00000623228 1824 ntBASIC14.39□□□□□ -0.11
CCL3L1P16619 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
CCL3L1P16619 AC003669.1-201ENST00000334569 611 ntBASIC14.39□□□□□ -0.11
CCL3L1P16619 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
CCL3L1P16619 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.39□□□□□ -0.11
CCL3L1P16619 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL3L1P16619 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.39□□□□□ -0.11
CCL3L1P16619 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CCL3L1P16619 KRT126P-201ENST00000549467 1181 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms