Protein–RNA interactions for Protein: P13994

CCDC130, Coiled-coil domain-containing protein 130, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130P13994 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC130P13994 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC130P13994 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 AL031284.1-201ENST00000419297 478 ntBASIC18.47■□□□□ 0.55
CCDC130P13994 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.47■□□□□ 0.55
CCDC130P13994 AC079776.4-201ENST00000511039 504 ntBASIC18.47■□□□□ 0.55
CCDC130P13994 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 AL662844.1-201ENST00000546340 181 ntBASIC18.47■□□□□ 0.55
CCDC130P13994 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.47■□□□□ 0.55
CCDC130P13994 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.47■□□□□ 0.55
CCDC130P13994 AC064862.7-201ENST00000604520 867 ntBASIC18.47■□□□□ 0.55
CCDC130P13994 MIR7706-201ENST00000613747 67 ntBASIC18.47■□□□□ 0.55
CCDC130P13994 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC130P13994 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.47■□□□□ 0.55
CCDC130P13994 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CCDC130P13994 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CCDC130P13994 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CCDC130P13994 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
CCDC130P13994 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CCDC130P13994 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
CCDC130P13994 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
CCDC130P13994 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC130P13994 PRYP5-201ENST00000451909 266 ntBASIC18.46■□□□□ 0.55
CCDC130P13994 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.46■□□□□ 0.55
CCDC130P13994 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC130P13994 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.46■□□□□ 0.55
CCDC130P13994 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC130P13994 FAM215A-202ENST00000632077 792 ntBASIC18.46■□□□□ 0.55
CCDC130P13994 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC130P13994 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC130P13994 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC130P13994 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC130P13994 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.46■□□□□ 0.55
CCDC130P13994 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CCDC130P13994 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.46■□□□□ 0.55
CCDC130P13994 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC130P13994 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
CCDC130P13994 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC130P13994 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.45■□□□□ 0.54
CCDC130P13994 OR7E14P-202ENST00000530490 1290 ntBASIC18.45■□□□□ 0.54
CCDC130P13994 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.45■□□□□ 0.54
CCDC130P13994 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 AP001005.1-201ENST00000571755 1248 ntBASIC18.45■□□□□ 0.54
CCDC130P13994 AC090340.1-201ENST00000620778 4980 ntBASIC18.45■□□□□ 0.54
CCDC130P13994 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
CCDC130P13994 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
CCDC130P13994 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.45■□□□□ 0.54
CCDC130P13994 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
CCDC130P13994 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC130P13994 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC130P13994 AC097637.2-201ENST00000624096 1997 ntBASIC18.44■□□□□ 0.54
CCDC130P13994 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC130P13994 AL135999.2-201ENST00000622438 1686 ntBASIC18.44■□□□□ 0.54
CCDC130P13994 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC130P13994 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
CCDC130P13994 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms