Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
SCG2P13521 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 AL160237.2-201ENST00000556165 472 ntBASIC20.04■□□□□ 0.8
SCG2P13521 AC021087.4-201ENST00000563761 564 ntBASIC20.04■□□□□ 0.8
SCG2P13521 BANP-227ENST00000626016 2144 ntTSL 2 BASIC20.04■□□□□ 0.8
SCG2P13521 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.04■□□□□ 0.8
SCG2P13521 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 AL023806.1-201ENST00000603994 1649 ntBASIC20.04■□□□□ 0.8
SCG2P13521 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC20.04■□□□□ 0.8
SCG2P13521 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
SCG2P13521 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC20.04■□□□□ 0.8
SCG2P13521 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.04■□□□□ 0.8
SCG2P13521 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCG2P13521 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCG2P13521 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC20.03■□□□□ 0.8
SCG2P13521 AC116353.5-201ENST00000638148 1699 ntBASIC20.03■□□□□ 0.8
SCG2P13521 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.03■□□□□ 0.8
SCG2P13521 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC20.03■□□□□ 0.8
SCG2P13521 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 SLC25A1P3-201ENST00000395415 828 ntBASIC20.03■□□□□ 0.8
SCG2P13521 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.03■□□□□ 0.8
SCG2P13521 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC20.03■□□□□ 0.8
SCG2P13521 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.03■□□□□ 0.8
SCG2P13521 MTDHP4-201ENST00000600287 670 ntBASIC20.03■□□□□ 0.8
SCG2P13521 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.03■□□□□ 0.8
SCG2P13521 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.03■□□□□ 0.8
SCG2P13521 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC20.03■□□□□ 0.8
SCG2P13521 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.03■□□□□ 0.8
SCG2P13521 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SCG2P13521 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SCG2P13521 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCG2P13521 AC097637.2-201ENST00000624096 1997 ntBASIC20.03■□□□□ 0.8
SCG2P13521 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SCG2P13521 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.02■□□□□ 0.8
SCG2P13521 AC090340.1-201ENST00000620778 4980 ntBASIC20.02■□□□□ 0.8
SCG2P13521 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SCG2P13521 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.02■□□□□ 0.8
SCG2P13521 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.02■□□□□ 0.8
SCG2P13521 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.02■□□□□ 0.8
SCG2P13521 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.02■□□□□ 0.8
SCG2P13521 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SCG2P13521 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.02■□□□□ 0.8
SCG2P13521 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 AC025062.2-201ENST00000605477 670 ntBASIC20.02■□□□□ 0.8
SCG2P13521 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC20.02■□□□□ 0.8
SCG2P13521 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.02■□□□□ 0.8
SCG2P13521 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 AC138932.1-201ENST00000534164 6830 ntBASIC20.02■□□□□ 0.8
SCG2P13521 CEP83-AS1-201ENST00000623122 2482 ntBASIC20.02■□□□□ 0.8
SCG2P13521 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SCG2P13521 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCG2P13521 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCG2P13521 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC20.02■□□□□ 0.79
SCG2P13521 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCG2P13521 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
SCG2P13521 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCG2P13521 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCG2P13521 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SCG2P13521 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG2P13521 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCG2P13521 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms