Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CALM3P0DP25 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CALM3P0DP25 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CALM3P0DP25 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CALM3P0DP25 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC20.23■□□□□ 0.83
CALM3P0DP25 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.23■□□□□ 0.83
CALM3P0DP25 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.23■□□□□ 0.83
CALM3P0DP25 FAM197Y8-203ENST00000450145 560 ntBASIC20.23■□□□□ 0.83
CALM3P0DP25 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.23■□□□□ 0.83
CALM3P0DP25 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.23■□□□□ 0.83
CALM3P0DP25 AC104692.2-201ENST00000603054 253 ntBASIC20.23■□□□□ 0.83
CALM3P0DP25 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.23■□□□□ 0.83
CALM3P0DP25 TP73-AS1-207ENST00000624167 988 ntBASIC20.23■□□□□ 0.83
CALM3P0DP25 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.23■□□□□ 0.83
CALM3P0DP25 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 PP12613-201ENST00000424958 2230 ntBASIC20.23■□□□□ 0.83
CALM3P0DP25 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 AL023806.1-201ENST00000603994 1649 ntBASIC20.23■□□□□ 0.83
CALM3P0DP25 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CALM3P0DP25 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
CALM3P0DP25 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC20.23■□□□□ 0.83
CALM3P0DP25 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC20.23■□□□□ 0.83
CALM3P0DP25 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CALM3P0DP25 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CALM3P0DP25 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.23■□□□□ 0.83
CALM3P0DP25 AC116353.5-201ENST00000638148 1699 ntBASIC20.22■□□□□ 0.83
CALM3P0DP25 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC20.22■□□□□ 0.83
CALM3P0DP25 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.22■□□□□ 0.83
CALM3P0DP25 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC20.22■□□□□ 0.83
CALM3P0DP25 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CALM3P0DP25 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC20.22■□□□□ 0.83
CALM3P0DP25 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC20.22■□□□□ 0.83
CALM3P0DP25 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.22■□□□□ 0.83
CALM3P0DP25 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.22■□□□□ 0.83
CALM3P0DP25 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CALM3P0DP25 AC064862.7-201ENST00000604520 867 ntBASIC20.22■□□□□ 0.83
CALM3P0DP25 AC025062.2-201ENST00000605477 670 ntBASIC20.22■□□□□ 0.83
CALM3P0DP25 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CALM3P0DP25 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC20.22■□□□□ 0.83
CALM3P0DP25 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CALM3P0DP25 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CALM3P0DP25 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CALM3P0DP25 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
CALM3P0DP25 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.21■□□□□ 0.83
CALM3P0DP25 AF186996.4-201ENST00000467186 377 ntBASIC20.21■□□□□ 0.83
CALM3P0DP25 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 RNPS1P1-201ENST00000507437 918 ntBASIC20.21■□□□□ 0.83
CALM3P0DP25 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC20.21■□□□□ 0.83
CALM3P0DP25 AC139887.3-201ENST00000568585 713 ntBASIC20.21■□□□□ 0.83
CALM3P0DP25 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.21■□□□□ 0.83
CALM3P0DP25 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC20.21■□□□□ 0.83
CALM3P0DP25 AC141586.5-201ENST00000624546 2050 ntBASIC20.21■□□□□ 0.83
CALM3P0DP25 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CALM3P0DP25 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CALM3P0DP25 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms