Protein–RNA interactions for Protein: P09874

PARP1, Poly [ADP-ribose] polymerase 1, humanhuman

Known RBP Predictions only

Length 1,014 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP1P09874 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.25■□□□□ 0.83
PARP1P09874 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.25■□□□□ 0.83
PARP1P09874 AC116407.3-201ENST00000623905 1129 ntBASIC20.25■□□□□ 0.83
PARP1P09874 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.25■□□□□ 0.83
PARP1P09874 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PARP1P09874 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC20.25■□□□□ 0.83
PARP1P09874 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC20.25■□□□□ 0.83
PARP1P09874 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PARP1P09874 NCF1C-201ENST00000438382 1427 ntBASIC20.25■□□□□ 0.83
PARP1P09874 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.25■□□□□ 0.83
PARP1P09874 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PARP1P09874 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.25■□□□□ 0.83
PARP1P09874 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PARP1P09874 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PARP1P09874 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PARP1P09874 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.24■□□□□ 0.83
PARP1P09874 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 AL590627.1-203ENST00000421194 1026 ntBASIC20.24■□□□□ 0.83
PARP1P09874 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC20.24■□□□□ 0.83
PARP1P09874 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.24■□□□□ 0.83
PARP1P09874 AC105339.3-201ENST00000560043 636 ntBASIC20.24■□□□□ 0.83
PARP1P09874 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.24■□□□□ 0.83
PARP1P09874 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.24■□□□□ 0.83
PARP1P09874 AC006557.2-201ENST00000592985 1240 ntBASIC20.24■□□□□ 0.83
PARP1P09874 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.24■□□□□ 0.83
PARP1P09874 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC20.24■□□□□ 0.83
PARP1P09874 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PARP1P09874 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
PARP1P09874 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
PARP1P09874 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
PARP1P09874 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC20.23■□□□□ 0.83
PARP1P09874 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC20.23■□□□□ 0.83
PARP1P09874 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.23■□□□□ 0.83
PARP1P09874 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC20.23■□□□□ 0.83
PARP1P09874 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC20.23■□□□□ 0.83
PARP1P09874 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.23■□□□□ 0.83
PARP1P09874 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.23■□□□□ 0.83
PARP1P09874 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
PARP1P09874 AC120114.3-201ENST00000611923 658 ntBASIC20.23■□□□□ 0.83
PARP1P09874 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.23■□□□□ 0.83
PARP1P09874 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
PARP1P09874 BX640515.1-201ENST00000617215 977 ntBASIC20.23■□□□□ 0.83
PARP1P09874 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.23■□□□□ 0.83
PARP1P09874 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC20.23■□□□□ 0.83
PARP1P09874 IL9RP2-201ENST00000423948 1312 ntBASIC20.23■□□□□ 0.83
PARP1P09874 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.23■□□□□ 0.83
PARP1P09874 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PARP1P09874 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 AL135999.2-201ENST00000622438 1686 ntBASIC20.22■□□□□ 0.83
PARP1P09874 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.22■□□□□ 0.83
PARP1P09874 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 AC092910.1-201ENST00000482027 1129 ntBASIC20.22■□□□□ 0.83
PARP1P09874 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC20.22■□□□□ 0.83
PARP1P09874 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.22■□□□□ 0.83
PARP1P09874 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.22■□□□□ 0.83
PARP1P09874 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.22■□□□□ 0.83
PARP1P09874 AC004706.3-202ENST00000621574 984 ntBASIC20.22■□□□□ 0.83
PARP1P09874 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.22■□□□□ 0.83
PARP1P09874 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC20.22■□□□□ 0.83
PARP1P09874 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PARP1P09874 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
PARP1P09874 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms