Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
TCRAP04437 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC13.3□□□□□ -0.28
TCRAP04437 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 REXO2-216ENST00000544196 452 ntTSL 3 BASIC13.3□□□□□ -0.28
TCRAP04437 FITM1-202ENST00000559294 800 ntBASIC13.3□□□□□ -0.28
TCRAP04437 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC13.3□□□□□ -0.28
TCRAP04437 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 AC093525.9-201ENST00000624961 1746 ntBASIC13.3□□□□□ -0.28
TCRAP04437 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.3□□□□□ -0.28
TCRAP04437 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC13.3□□□□□ -0.28
TCRAP04437 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
TCRAP04437 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 KRT89P-201ENST00000620027 1478 ntBASIC13.29□□□□□ -0.28
TCRAP04437 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.29□□□□□ -0.28
TCRAP04437 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 AL162727.3-201ENST00000635661 2787 ntBASIC13.29□□□□□ -0.28
TCRAP04437 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 WT1-209ENST00000530998 2421 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 PEX7-202ENST00000367756 680 ntTSL 3 BASIC13.29□□□□□ -0.28
TCRAP04437 HES2-202ENST00000377836 507 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.29□□□□□ -0.28
TCRAP04437 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 NEK4P2-201ENST00000580004 1012 ntBASIC13.29□□□□□ -0.28
TCRAP04437 NT5C-210ENST00000582160 860 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
TCRAP04437 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
TCRAP04437 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC13.28□□□□□ -0.28
TCRAP04437 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
TCRAP04437 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms