Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
GAPDHP04406 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
GAPDHP04406 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.64□□□□□ -0.07
GAPDHP04406 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC14.64□□□□□ -0.07
GAPDHP04406 DUTP2-201ENST00000519164 463 ntBASIC14.64□□□□□ -0.07
GAPDHP04406 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC14.64□□□□□ -0.07
GAPDHP04406 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC14.64□□□□□ -0.07
GAPDHP04406 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.64□□□□□ -0.07
GAPDHP04406 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.64□□□□□ -0.07
GAPDHP04406 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.64□□□□□ -0.07
GAPDHP04406 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.64□□□□□ -0.07
GAPDHP04406 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
GAPDHP04406 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
GAPDHP04406 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC14.63□□□□□ -0.07
GAPDHP04406 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC14.63□□□□□ -0.07
GAPDHP04406 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC14.63□□□□□ -0.07
GAPDHP04406 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.63□□□□□ -0.07
GAPDHP04406 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 CLN6-204ENST00000564752 900 ntTSL 3 BASIC14.63□□□□□ -0.07
GAPDHP04406 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
GAPDHP04406 CLN6-214ENST00000636314 442 ntTSL 3 BASIC14.63□□□□□ -0.07
GAPDHP04406 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 AL513477.1-201ENST00000602865 2407 ntBASIC14.63□□□□□ -0.07
GAPDHP04406 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.63□□□□□ -0.07
GAPDHP04406 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
GAPDHP04406 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
GAPDHP04406 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
GAPDHP04406 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.62□□□□□ -0.07
GAPDHP04406 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
GAPDHP04406 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
GAPDHP04406 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC14.62□□□□□ -0.07
GAPDHP04406 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC14.62□□□□□ -0.07
GAPDHP04406 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC14.62□□□□□ -0.07
GAPDHP04406 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
GAPDHP04406 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
GAPDHP04406 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
GAPDHP04406 IGHGP-201ENST00000390555 1178 ntBASIC14.62□□□□□ -0.07
GAPDHP04406 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms