Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFAP04085 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PDGFAP04085 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PDGFAP04085 PMPCAP1-201ENST00000508114 1576 ntBASIC16.33■□□□□ 0.2
PDGFAP04085 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 AC132938.6-201ENST00000623828 1655 ntBASIC16.33■□□□□ 0.2
PDGFAP04085 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.33■□□□□ 0.2
PDGFAP04085 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PDGFAP04085 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PDGFAP04085 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.33■□□□□ 0.2
PDGFAP04085 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PDGFAP04085 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PDGFAP04085 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFAP04085 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFAP04085 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFAP04085 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDGFAP04085 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.32■□□□□ 0.2
PDGFAP04085 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFAP04085 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.32■□□□□ 0.2
PDGFAP04085 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.32■□□□□ 0.2
PDGFAP04085 AL596442.2-201ENST00000610240 980 ntBASIC16.32■□□□□ 0.2
PDGFAP04085 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFAP04085 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.32■□□□□ 0.2
PDGFAP04085 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PDGFAP04085 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PDGFAP04085 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 SIRPAP1-201ENST00000448467 1770 ntBASIC16.31■□□□□ 0.2
PDGFAP04085 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFAP04085 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDGFAP04085 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDGFAP04085 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 AC211486.1-202ENST00000416371 468 ntBASIC16.31■□□□□ 0.2
PDGFAP04085 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.31■□□□□ 0.2
PDGFAP04085 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 AC108751.1-201ENST00000490852 363 ntBASIC16.31■□□□□ 0.2
PDGFAP04085 AC211476.1-201ENST00000503899 468 ntBASIC16.31■□□□□ 0.2
PDGFAP04085 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.31■□□□□ 0.2
PDGFAP04085 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 MTDHP5-201ENST00000598980 586 ntBASIC16.31■□□□□ 0.2
PDGFAP04085 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.31■□□□□ 0.2
PDGFAP04085 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PDGFAP04085 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PDGFAP04085 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PDGFAP04085 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
PDGFAP04085 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 AC010460.3-201ENST00000511359 1579 ntBASIC16.3■□□□□ 0.2
PDGFAP04085 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PDGFAP04085 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms