Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 AC027369.6-201ENST00000525520 931 ntBASIC19.72■□□□□ 0.75
ALDH1A1P00352 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 AC005412.3-201ENST00000580309 715 ntBASIC19.72■□□□□ 0.75
ALDH1A1P00352 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 AC100757.3-201ENST00000622361 1406 ntBASIC19.72■□□□□ 0.75
ALDH1A1P00352 AL590560.3-201ENST00000623350 461 ntBASIC19.72■□□□□ 0.75
ALDH1A1P00352 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ALDH1A1P00352 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
ALDH1A1P00352 AL096828.2-201ENST00000567259 1965 ntBASIC19.72■□□□□ 0.75
ALDH1A1P00352 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 IGHV3-71-201ENST00000523324 359 ntBASIC19.71■□□□□ 0.75
ALDH1A1P00352 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
ALDH1A1P00352 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
ALDH1A1P00352 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 AC022144.1-201ENST00000602255 1580 ntBASIC19.7■□□□□ 0.74
ALDH1A1P00352 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 WASH6P-202ENST00000359512 1437 ntBASIC19.7■□□□□ 0.74
ALDH1A1P00352 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 GNAS-203ENST00000306120 1878 ntBASIC19.7■□□□□ 0.74
ALDH1A1P00352 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.7■□□□□ 0.74
ALDH1A1P00352 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
ALDH1A1P00352 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 AC046185.3-201ENST00000623228 1824 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 AC073592.3-201ENST00000625118 1834 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 GRAMD4P3-201ENST00000621665 1669 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 MIR346-201ENST00000362234 95 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 U91328.1-201ENST00000437528 223 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 SPTLC1P1-201ENST00000447199 261 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
ALDH1A1P00352 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
ALDH1A1P00352 AP000842.3-202ENST00000569238 1080 ntBASIC19.69■□□□□ 0.74
ALDH1A1P00352 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms