Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC20.17■□□□□ 0.82
CTDNEP1O95476 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.17■□□□□ 0.82
CTDNEP1O95476 NUS1P1-201ENST00000446295 882 ntBASIC20.17■□□□□ 0.82
CTDNEP1O95476 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
CTDNEP1O95476 FOSL1P1-201ENST00000511041 816 ntBASIC20.17■□□□□ 0.82
CTDNEP1O95476 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC20.17■□□□□ 0.82
CTDNEP1O95476 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.17■□□□□ 0.82
CTDNEP1O95476 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 AC005915.1-201ENST00000624912 2018 ntBASIC20.17■□□□□ 0.82
CTDNEP1O95476 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CTDNEP1O95476 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTDNEP1O95476 EGFEM1P-202ENST00000431685 1563 ntBASIC20.17■□□□□ 0.82
CTDNEP1O95476 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CTDNEP1O95476 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 AC092068.3-201ENST00000587894 2016 ntBASIC20.16■□□□□ 0.82
CTDNEP1O95476 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 AC073592.4-201ENST00000623827 446 ntBASIC20.16■□□□□ 0.82
CTDNEP1O95476 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
CTDNEP1O95476 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTDNEP1O95476 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 AC132008.2-207ENST00000454517 770 ntBASIC20.15■□□□□ 0.82
CTDNEP1O95476 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 AL591684.3-201ENST00000605187 298 ntBASIC20.15■□□□□ 0.82
CTDNEP1O95476 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 AC105020.1-201ENST00000435356 2205 ntBASIC20.15■□□□□ 0.82
CTDNEP1O95476 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC20.15■□□□□ 0.82
CTDNEP1O95476 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
CTDNEP1O95476 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CTDNEP1O95476 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CTDNEP1O95476 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CTDNEP1O95476 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.14■□□□□ 0.82
CTDNEP1O95476 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC20.14■□□□□ 0.82
CTDNEP1O95476 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.82
CTDNEP1O95476 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CTDNEP1O95476 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
CTDNEP1O95476 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 SIGLEC16-201ENST00000599858 1437 ntBASIC20.14■□□□□ 0.81
CTDNEP1O95476 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
CTDNEP1O95476 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
CTDNEP1O95476 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms