Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 AC109462.3-201ENST00000573934 613 ntBASIC16.27■□□□□ 0.2
SOX30O94993 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.27■□□□□ 0.2
SOX30O94993 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.27■□□□□ 0.2
SOX30O94993 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX30O94993 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SOX30O94993 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SOX30O94993 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
SOX30O94993 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.27■□□□□ 0.19
SOX30O94993 AL353593.2-201ENST00000602529 1483 ntBASIC16.27■□□□□ 0.19
SOX30O94993 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.27■□□□□ 0.19
SOX30O94993 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.27■□□□□ 0.19
SOX30O94993 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
SOX30O94993 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SOX30O94993 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.27■□□□□ 0.19
SOX30O94993 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SOX30O94993 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SOX30O94993 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SOX30O94993 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SOX30O94993 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.26■□□□□ 0.19
SOX30O94993 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SOX30O94993 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.26■□□□□ 0.19
SOX30O94993 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SOX30O94993 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.26■□□□□ 0.19
SOX30O94993 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.26■□□□□ 0.19
SOX30O94993 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
SOX30O94993 TPSP2-201ENST00000561760 610 ntBASIC16.26■□□□□ 0.19
SOX30O94993 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC16.26■□□□□ 0.19
SOX30O94993 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.26■□□□□ 0.19
SOX30O94993 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SOX30O94993 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SOX30O94993 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.26■□□□□ 0.19
SOX30O94993 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.26■□□□□ 0.19
SOX30O94993 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SOX30O94993 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.26■□□□□ 0.19
SOX30O94993 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SOX30O94993 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.25■□□□□ 0.19
SOX30O94993 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
SOX30O94993 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.25■□□□□ 0.19
SOX30O94993 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SOX30O94993 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SOX30O94993 AC003669.1-201ENST00000334569 611 ntBASIC16.25■□□□□ 0.19
SOX30O94993 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 ATP5G2P1-201ENST00000433580 426 ntBASIC16.25■□□□□ 0.19
SOX30O94993 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.25■□□□□ 0.19
SOX30O94993 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.25■□□□□ 0.19
SOX30O94993 AC012615.1-201ENST00000565797 1299 ntBASIC16.25■□□□□ 0.19
SOX30O94993 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.25■□□□□ 0.19
SOX30O94993 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.25■□□□□ 0.19
SOX30O94993 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 STK25P1-201ENST00000585406 838 ntBASIC16.25■□□□□ 0.19
SOX30O94993 AP002414.4-201ENST00000589764 1148 ntBASIC16.25■□□□□ 0.19
SOX30O94993 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.25■□□□□ 0.19
SOX30O94993 AC092329.2-201ENST00000598402 547 ntBASIC16.25■□□□□ 0.19
SOX30O94993 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.25■□□□□ 0.19
SOX30O94993 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.25■□□□□ 0.19
SOX30O94993 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SOX30O94993 AL645608.8-201ENST00000606034 2086 ntBASIC16.25■□□□□ 0.19
SOX30O94993 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.25■□□□□ 0.19
SOX30O94993 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SOX30O94993 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SOX30O94993 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SOX30O94993 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms