Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC15.89■□□□□ 0.13
CLPXO76031 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC15.89■□□□□ 0.13
CLPXO76031 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.89■□□□□ 0.13
CLPXO76031 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC15.89■□□□□ 0.13
CLPXO76031 HLA-A-209ENST00000638375 975 ntBASIC15.89■□□□□ 0.13
CLPXO76031 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
CLPXO76031 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
CLPXO76031 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLPXO76031 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CLPXO76031 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.89■□□□□ 0.13
CLPXO76031 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CLPXO76031 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CLPXO76031 RCC2P3-201ENST00000418112 1537 ntBASIC15.89■□□□□ 0.13
CLPXO76031 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CLPXO76031 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.88■□□□□ 0.13
CLPXO76031 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLPXO76031 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 AC092384.3-202ENST00000564646 2873 ntBASIC15.88■□□□□ 0.13
CLPXO76031 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.88■□□□□ 0.13
CLPXO76031 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC15.88■□□□□ 0.13
CLPXO76031 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CLPXO76031 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 AL353708.3-201ENST00000610272 989 ntBASIC15.88■□□□□ 0.13
CLPXO76031 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 AC116353.5-201ENST00000638148 1699 ntBASIC15.88■□□□□ 0.13
CLPXO76031 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 AL662844.4-201ENST00000606367 2838 ntBASIC15.88■□□□□ 0.13
CLPXO76031 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CLPXO76031 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CLPXO76031 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC15.87■□□□□ 0.13
CLPXO76031 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.87■□□□□ 0.13
CLPXO76031 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
CLPXO76031 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 DBET-201ENST00000630918 3363 ntBASIC15.87■□□□□ 0.13
CLPXO76031 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.87■□□□□ 0.13
CLPXO76031 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC15.87■□□□□ 0.13
CLPXO76031 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.87■□□□□ 0.13
CLPXO76031 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC15.87■□□□□ 0.13
CLPXO76031 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC15.87■□□□□ 0.13
CLPXO76031 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
CLPXO76031 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.87■□□□□ 0.13
CLPXO76031 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC15.87■□□□□ 0.13
CLPXO76031 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CLPXO76031 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 KRT8P41-201ENST00000533985 1514 ntBASIC15.87■□□□□ 0.13
CLPXO76031 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC15.87■□□□□ 0.13
CLPXO76031 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC15.87■□□□□ 0.13
CLPXO76031 AC092171.3-201ENST00000610122 2651 ntBASIC15.87■□□□□ 0.13
CLPXO76031 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC15.87■□□□□ 0.13
CLPXO76031 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CLPXO76031 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
CLPXO76031 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC15.86■□□□□ 0.13
CLPXO76031 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms