Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AP000867.4-201ENST00000641616 219 ntBASIC18.15■□□□□ 0.5
LRCH4O75427 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH4O75427 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRCH4O75427 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRCH4O75427 LINC02012-201ENST00000608206 1725 ntBASIC18.15■□□□□ 0.5
LRCH4O75427 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.15■□□□□ 0.5
LRCH4O75427 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC18.14■□□□□ 0.5
LRCH4O75427 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.14■□□□□ 0.5
LRCH4O75427 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH4O75427 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH4O75427 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
LRCH4O75427 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH4O75427 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH4O75427 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH4O75427 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH4O75427 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRCH4O75427 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
LRCH4O75427 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRCH4O75427 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.14■□□□□ 0.49
LRCH4O75427 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
LRCH4O75427 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRCH4O75427 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
LRCH4O75427 NUS1P2-201ENST00000417358 873 ntBASIC18.14■□□□□ 0.49
LRCH4O75427 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.14■□□□□ 0.49
LRCH4O75427 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
LRCH4O75427 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC18.14■□□□□ 0.49
LRCH4O75427 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.14■□□□□ 0.49
LRCH4O75427 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC18.14■□□□□ 0.49
LRCH4O75427 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.14■□□□□ 0.49
LRCH4O75427 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRCH4O75427 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRCH4O75427 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRCH4O75427 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRCH4O75427 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.13■□□□□ 0.49
LRCH4O75427 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.13■□□□□ 0.49
LRCH4O75427 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRCH4O75427 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.13■□□□□ 0.49
LRCH4O75427 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.13■□□□□ 0.49
LRCH4O75427 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRCH4O75427 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.13■□□□□ 0.49
LRCH4O75427 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.13■□□□□ 0.49
LRCH4O75427 MIR5100-201ENST00000579544 119 ntBASIC18.13■□□□□ 0.49
LRCH4O75427 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.13■□□□□ 0.49
LRCH4O75427 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.13■□□□□ 0.49
LRCH4O75427 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRCH4O75427 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.13■□□□□ 0.49
LRCH4O75427 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC18.13■□□□□ 0.49
LRCH4O75427 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LRCH4O75427 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRCH4O75427 AL121761.2-201ENST00000598007 1648 ntBASIC18.12■□□□□ 0.49
LRCH4O75427 AC148477.5-201ENST00000625164 1645 ntBASIC18.12■□□□□ 0.49
LRCH4O75427 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC18.12■□□□□ 0.49
LRCH4O75427 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LRCH4O75427 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
LRCH4O75427 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
LRCH4O75427 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRCH4O75427 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.12■□□□□ 0.49
LRCH4O75427 AC138894.3-201ENST00000603787 634 ntBASIC18.12■□□□□ 0.49
LRCH4O75427 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.12■□□□□ 0.49
LRCH4O75427 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms