Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC15.73■□□□□ 0.11
PTP4A3O75365 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.73■□□□□ 0.11
PTP4A3O75365 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC15.73■□□□□ 0.11
PTP4A3O75365 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC15.73■□□□□ 0.11
PTP4A3O75365 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC15.73■□□□□ 0.11
PTP4A3O75365 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
PTP4A3O75365 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC15.73■□□□□ 0.11
PTP4A3O75365 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
PTP4A3O75365 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
PTP4A3O75365 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PTP4A3O75365 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
PTP4A3O75365 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.72■□□□□ 0.11
PTP4A3O75365 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
PTP4A3O75365 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC15.72■□□□□ 0.11
PTP4A3O75365 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 AC090616.6-201ENST00000582640 721 ntBASIC15.72■□□□□ 0.11
PTP4A3O75365 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 AL592071.1-201ENST00000611956 408 ntBASIC15.72■□□□□ 0.11
PTP4A3O75365 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
PTP4A3O75365 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
PTP4A3O75365 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC15.72■□□□□ 0.11
PTP4A3O75365 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
PTP4A3O75365 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.71■□□□□ 0.11
PTP4A3O75365 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.71■□□□□ 0.11
PTP4A3O75365 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.71■□□□□ 0.11
PTP4A3O75365 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PTP4A3O75365 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 KRT8P10-201ENST00000450021 1447 ntBASIC15.71■□□□□ 0.11
PTP4A3O75365 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
PTP4A3O75365 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.71■□□□□ 0.11
PTP4A3O75365 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC15.71■□□□□ 0.11
PTP4A3O75365 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.71■□□□□ 0.11
PTP4A3O75365 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC15.71■□□□□ 0.11
PTP4A3O75365 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.71■□□□□ 0.11
PTP4A3O75365 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC15.71■□□□□ 0.11
PTP4A3O75365 AL136038.3-201ENST00000561909 1096 ntBASIC15.71■□□□□ 0.11
PTP4A3O75365 AC011498.5-201ENST00000592027 486 ntBASIC15.71■□□□□ 0.11
PTP4A3O75365 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.71■□□□□ 0.11
PTP4A3O75365 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.71■□□□□ 0.11
PTP4A3O75365 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
PTP4A3O75365 IGHV3-41-201ENST00000613121 348 ntBASIC15.71■□□□□ 0.11
PTP4A3O75365 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC15.71■□□□□ 0.11
PTP4A3O75365 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
PTP4A3O75365 AC005915.1-201ENST00000624912 2018 ntBASIC15.71■□□□□ 0.11
PTP4A3O75365 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.71■□□□□ 0.11
PTP4A3O75365 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
PTP4A3O75365 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A3O75365 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A3O75365 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A3O75365 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A3O75365 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A3O75365 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A3O75365 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
PTP4A3O75365 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
PTP4A3O75365 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A3O75365 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A3O75365 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A3O75365 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.7■□□□□ 0.1
PTP4A3O75365 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A3O75365 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A3O75365 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PTP4A3O75365 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms